Chr:
Chr6
Start:
24243552
End:
24251896
Strand:
+
Ref_name:
LOC107281192
Sequence
(XM_015786448.2):
AAUAAAAAAAAUCCAGACUGGACUUUGCUUCUCGCCUUUGCCUUCCUCCUCUUCCCCUCUCCAGUCAAGCGCUCAGUUUUCCAGCGAGGGAGAGGGCGCGCCAUGGCGGAGCUCUCGCCGAUGAGGGAGGUGGUAUCGAUGCACCCGCUGCUUCACCUCGACGGCGGCGAGAGGGAGGCGGUGUUCGCGGCAGGAGACCAGACGUACGGCGAGUUCCGCCUGACGCUCCUGUGGUUGGCUGUCAAGGGAGUCUUGCGGAAGCGAGACGAUAUGGAUACCCAGCUUGCAGAGUGCCGAGCUCACCAAGCAGGACUUGAGCAGUCCAUUGUUGAGACCAACGGGGCGCUUCGAGACGCUGACCGGCAGCAGGCCGCGGCGCUGGUUCAGCGCAGGCUCGACAUGCAGGCGUCCCUCAAGUACCAGGACCACGAGGAGUUCACGCUGGUGAGGGAGCUCCAAAAGAUGGCUAUUCUCGUUGACAAGUACUACAACGAGAUGUUGGCACUUACCACGUCUGAGCACUGACGGGCUACGGUUAAGUGAGCAAGAGCAAAUAGCAACAUUAGAGGUAGAAUAUCUAUUUGAAUUUUCUUUCAGCAAGACGAAGUGACAAGCUACGGUUGAGUGAGCAAGAGCAAAUAGCAGCAUCAGAGCAAGACGGAGUUCAGGAUCAUCUUUUUUAUCAGCAAGACGCACUUUUUUGGGUACUGUUGCUGUGGUGCGAUGUCUCUGGGUACUGUUGUGGAUGAUACUCUGACUCUUGCUGUGGUGCGAUAUGUCUCGGAUGGGAUGAUACUCUGACUCGGAUCUAUUGCUGUGGGUGGUGCAUUACGGAUACUCUGGGCCUGUUUGGCACAGCUCUAGCUCCAGCUCCACCCCUCCUGGAGCUGGAGCUCAGCCAAACAGUUUCAGCUCCACCAAAACUGGGAGUGGAGUUGGGUGGAGCUCUCUCACAAAAUGUACUAGAGUUGUGGAGCUGGGUUUAGGCAGCUCCACAACUUCACUCCAGACUCAACUCCUAGAGUUAUAUUUAGGAGUUGGAGCUGUACCAAACAGGCCCUCUGACUCGACAUGUUGUCGCGGUGCUGUAGUGGUGCAUUACGGAAUACGGAUAUACUCGUAGUUUCGACCUUGAUUGCCGUAGUGCUGCUACUAGUCAGUCCGGUUUCCAGCUGUUAAUACAGUGGGCGUUCUUUUCAUACAACCUGAAGAAAAGCACGGCUGGUCCACUAAUUUUGAUCGAUUUUUUAUGCAACCCCUUUUGAUUGAUUUUGGGAUA
Sequence
(XM_026026107.1):
AAUAAAAAAAAUCCAGACUGGACUUUGCUUCUCGCCUUUGCCUUCCUCCUCUUCCCCUCUCCAGUCAAGCGCUCAGUUUUCCAGCGAGGGAGAGGGCGCGCCAUGGCGGAGCUCUCGCCGAUGAGGGAGGUGGUAUCGAUGCACCCGCUGCUUCACCUCGACGGCGGCGAGAGGGAGGCGGUGUUCGCGGCAGGAGACCAGACGUACGGCGAGUUCCGCCUGACGCUCCUGUGGUUGGCUGUCAAGGGAGUCUUGCGGAAGCGAGACGAUAUGGAUACCCAGCUUGCAGAGUGCCGAGCUCACCAAGCAGGACUUGAGCAGUCCAUUGUUGAGACCAACGGGGCGCUUCGAGACGCUGACCGGCAGCAGGCCGCGGCGCUGGUUCAGCGCAGGCUCGACAUGCAGGCGUCCCUCAAGUACCAGGACCACGAGGAGUUCACGCUGGUGAGGGAGCUCCAAAAGAUGGCUAUUCUCGUUGACAAGUACUACAACGAGAUGUUGGCACUUACCACGUCUGAGCACUGACGGGCUACGGUUAAGUGAGCAAGAGCAAAUAGCAACAUUAGAGGUAGAAUAUCUAUUUGAAUUUUCUUUCAGCAAGACGAAGUGACAAGCUACGGUUGAGUGAGCAAGAGCAAAUAGCAGCAUCAGAGUUUUUUUUUUCAGCAAGACGGAGUUCAGGAUCAUCUUUUUUAUCAGCAAGACGCACUUUUUUGGGUACUGUUGCUGUGGUGCGAUGUCUCUGGGUACUGUUGUGGAUGAUACUCUGACUCUUGCUGUGGUGCGAUAUGUCUCGGAUGGGAUGAUACUCUGACUCGGAUCUAUUGCUGUGGGUGGUGCAUUACGGAUACUCUGGGCCUGUUUGGCACAGCUCUAGCUCCAGCUCCACCCCUCCUGGAGCUGGAGCUCAGCCAAACAGUUUCAGCUCCACCAAAACUGGGAGUGGAGUUGGGUGGAGCUCUCUCACAAAAUGUACUAGAGUUGUGGAGCUGGGUUUAGGCAGCUCCACAACUUCACUCCAGACUCAACUCCUAGAGUUAUAUUUAGGAGUUGGAGCUGUACCAAACAGGCCCUCUGACUCGACAUGUUGUCGCGGUGCUGUAGUGGUGCAUUACGGAAUACGGAUAUACUCGUAGUUUCGACCUUGAUUGCCGUAGUGCUGCUACUAGUCAGUCCGGUUUCCAGCUGUUAAUACAGUGGGCGUUCUUUUCAUACAACCUGAAGAAAAGCACGGCUGGUCCACUAAUUUUGAUCGAUUUUUUAUGCAACCCCUUUUGAUUGAUUUUGGGAUA
Sequence
(XM_026026108.1):
UACAAUAAAAAAAAUCCAGACUGGACUUUGCUUCUCGCCUUUGCCUUCCUCCUCUUCCCCUCUCCAGUCAAGCGCUCAGUUUUCCAGCGAGGGAGAGGGCGCGCCAUGGCGGAGCUCUCGCCGAUGAGGGAGGUGGUAUCGAUGCACCCGCUGCUUCACCUCGACGGCGGCGAGAGGGAGGCGGUGUUCGCGGCAGGAGACCAGACGUACGGCGAGUUCCGCCUGACGCUCCUGUGGUUGGCUGUCAAGGGAGUCUUGCGGAAGCGAGACGAUAUGGAUACCCAGCUUGCAGAGUGCCGAGCUCACCAAGCAGGACUUGAGCAGUCCAUUGUUGAGACCAACGGGGCGCUUCGAGACGCUGACCGGCAGCAGGCCGCGGCGCUGGUUCAGCGCAGGCUCGACAUGCAGGCGUCCCUCAAGUACCAGGACCACGAGGAGUUCACGCUGGUGAGGGAGCUCCAAAAGAUGGCUAUUCUCGUUGACAAGUACUACAACGAGAUGUUGGCACUUACCACGUCUGAGCACUGACGGGCUACGGUUAAGUGAGCAAGAGCAAAUAGCAACAUUAGAGUUUUCUUUCAGCAAGACGAAGUGACAAGCUACGGUUGAGUGAGCAAGAGCAAAUAGCAGCAUCAGAGCAAGACGGAGUUCAGGAUCAUCUUUUUUAUCAGCAAGACGCACUUUUUUGGGUACUGUUGCUGUGGUGCGAUGUCUCUGGGUACUGUUGUGGAUGAUACUCUGACUCUUGCUGUGGUGCGAUAUGUCUCGGAUGGGAUGAUACUCUGACUCGGAUCUAUUGCUGUGGGUGGUGCAUUACGGAUACUCUGGGCCUGUUUGGCACAGCUCUAGCUCCAGCUCCACCCCUCCUGGAGCUGGAGCUCAGCCAAACAGUUUCAGCUCCACCAAAACUGGGAGUGGAGUUGGGUGGAGCUCUCUCACAAAAUGUACUAGAGUUGUGGAGCUGGGUUUAGGCAGCUCCACAACUUCACUCCAGACUCAACUCCUAGAGUUAUAUUUAGGAGUUGGAGCUGUACCAAACAGGCCCUCUGACUCGACAUGUUGUCGCGGUGCUGUAGUGGUGCAUUACGGAAUACGGAUAUACUCGUAGUUUCGACCUUGAUUGCCGUAGUGCUGCUACUAGUCAGUCCGGUUUCCAGCUGUUAAUACAGUGGGCGUUCUUUUCAUACAACCUGAAGAAAAGCACGGCUGGUCCACUAAUUUUGAUCGAUUUUUUAUGCAACCCCUUUUGAUUGAUUUUGGGAUA
Sequence
(XM_026026109.1):
UACAAUAAAAAAAAUCCAGACUGGACUUUGCUUCUCGCCUUUGCCUUCCUCCUCUUCCCCUCUCCAGUCAAGCGCUCAGUUUUCCAGCGAGGGAGAGGGCGCGCCAUGGCGGAGCUCUCGCCGAUGAGGGAGGUGGUAUCGAUGCACCCGCUGCUUCACCUCGACGGCGGCGAGAGGGAGGCGGUGUUCGCGGCAGGAGACCAGACGUACGGCGAGUUCCGCCUGACGCUCCUGUGGUUGGCUGUCAAGGGAGUCUUGCGGAAGCGAGACGAUAUGGAUACCCAGCUUGCAGAGUGCCGAGCUCACCAAGCAGGACUUGAGCAGUCCAUUGUUGAGACCAACGGGGCGCUUCGAGACGCUGACCGGCAGCAGGCCGCGGCGCUGGUUCAGCGCAGGCUCGACAUGCAGGCGUCCCUCAAGUACCAGGACCACGAGGAGUUCACGCUGGUGAGGGAGCUCCAAAAGAUGGCUAUUCUCGUUGACAAGUACUACAACGAGAUGUUGGCACUUACCACGUCUGAGCACUGACGGGCUACGGUUAAGUGAGCAAGAGCAAAUAGCAACAUUAGAGUUUUCUUUCAGCAAGACGAAGUGACAAGCUACGGUUGAGUGAGCAAGAGCAAAUAGCAGCAUCAGAGUUUUUUUUUUCAGCAAGACGGAGUUCAGGAUCAUCUUUUUUAUCAGCAAGACGCACUUUUUUGGGUACUGUUGCUGUGGUGCGAUGUCUCUGGGUACUGUUGUGGAUGAUACUCUGACUCUUGCUGUGGUGCGAUAUGUCUCGGAUGGGAUGAUACUCUGACUCGGAUCUAUUGCUGUGGGUGGUGCAUUACGGAUACUCUGGGCCUGUUUGGCACAGCUCUAGCUCCAGCUCCACCCCUCCUGGAGCUGGAGCUCAGCCAAACAGUUUCAGCUCCACCAAAACUGGGAGUGGAGUUGGGUGGAGCUCUCUCACAAAAUGUACUAGAGUUGUGGAGCUGGGUUUAGGCAGCUCCACAACUUCACUCCAGACUCAACUCCUAGAGUUAUAUUUAGGAGUUGGAGCUGUACCAAACAGGCCCUCUGACUCGACAUGUUGUCGCGGUGCUGUAGUGGUGCAUUACGGAAUACGGAUAUACUCGUAGUUUCGACCUUGAUUGCCGUAGUGCUGCUACUAGUCAGUCCGGUUUCCAGCUGUUAAUACAGUGGGCGUUCUUUUCAUACAACCUGAAGAAAAGCACGGCUGGUCCACUAAUUUUGAUCGAUUUUUUAUGCAACCCCUUUUGAUUGAUUUUGGGAUA
Sequence
(XR_001546529.2):
UCCAGACUGGACUUUGCUUCUCGCCUUUGCCUUCCUCCUCUUCCCCUCUCCAGUCAAGCGCUCAGUUUUCCAGCGAGGGAGAGGGCGCGCCAUGGCGGAGCUCUCGCCGAUGAGGGAGGUGGUAUCGAUGCACCCGCUGCUUCACCUCGACGGCGGCGAGAGGGAGGCGGUGUUCGCGGCAGGAGACCAGACGUACGGCGAGUUCCGCCUGACGCUCCUGUGGCUGUCAAGGGAGUCUUGCGGAAGCGAGACGAUAUGGAUACCCAGCUUGCAGAGUGCCGAGCUCACCAAGCAGGACUUGAGCAGUCCAUUGUUGAGACCAACGGGGCGCUUCGAGACGCUGACCGGCAGCAGGCCGCGGCGCUGGUUCAGCGCAGGCUCGACAUGCAGGCGUCCCUCAAGUACCAGGACCACGAGGAGUUCACGCUGGUGAGGGAGCUCCAAAAGAUGGCUAUUCUCGUUGACAAGUACUACAACGAGAUGUUGGCACUUACCACGUCUGAGCACUGACGGGCUACGGUUAAGUGAGCAAGAGCAAAUAGCAACAUUAGAGGUAGAAUAUCUAUUUGAAUUUUCUUUCAGCAAGACGAAGUGACAAGCUACGGUUGAGUGAGCAAGAGCAAAUAGCAGCAUCAGAGCAAGACGGAGUUCAGGAUCAUCUUUUUUAUCAGCAAGACGCACUUUUUUGGGUACUGUUGCUGUGGUGCGAUGUCUCUGGGUACUGUUGUGGAUGAUACUCUGACUCUUGCUGUGGUGCGAUAUGUCUCGGAUGGGAUGAUACUCUGACUCGGAUCUAUUGCUGUGGGUGGUGCAUUACGGAUACUCUGGGCCUGUUUGGCACAGCUCUAGCUCCAGCUCCACCCCUCCUGGAGCUGGAGCUCAGCCAAACAGUUUCAGCUCCACCAAAACUGGGAGUGGAGUUGGGUGGAGCUCUCUCACAAAAUGUACUAGAGUUGUGGAGCUGGGUUUAGGCAGCUCCACAACUUCACUCCAGACUCAACUCCUAGAGUUAUAUUUAGGAGUUGGAGCUGUACCAAACAGGCCCUCUGACUCGACAUGUUGUCGCGGUGCUGUAGUGGUGCAUUACGGAAUACGGAUAUACUCGUAGUUUCGACCUUGAUUGCCGUAGUGCUGCUACUAGUCAGUCCGGUUUCCAGCUGUUAAUACAGUGGGCGUUCUUUUCAUACAACCUGAAGAAAAGCACGGCUGGUCCACUAAUUUUGAUCGAUUUUUUAUGCAACCCCUUUUGAUUGAUUUUGGGAUA
Sequence
(XR_001546530.2):
ACAAUAAAAAAAAUCCAGACUGGACUUUGCUUCUCGCCUUUGCCUUCCUCCUCUUCCCCUCUCCAGUCAAGCGCUCAGUUUUCCAGCGAGGGAGAGGGCGCGCCAUGGCGGAGCUCUCGCCGAUGAGGGAGGUGGUAUCGAUGCACCCGCUGCUUCACCUCGACGGCGGCGAGAGGGAGGCGGUGUUCGCGGCAGGAGACCAGACGUACGGCGAGUUCCGCCUGACGCUCCUGUGGUACAAAGAGAAGUCAUUACUUUGCUCAAAGCAGACUUAAUGCCUCCCAGGGCUGUCAAGGGAGUCUUGCGGAAGCGAGACGAUAUGGAUACCCAGCUUGCAGAGUGCCGAGCUCACCAAGCAGGACUUGAGCAGUCCAUUGUUGAGACCAACGGGGCGCUUCGAGACGCUGACCGGCAGCAGGCCGCGGCGCUGGUUCAGCGCAGGCUCGACAUGCAGGCGUCCCUCAAGUACCAGGACCACGAGGAGUUCACGCUGGUGAGGGAGCUCCAAAAGAUGGCUAUUCUCGUUGACAAGUACUACAACGAGAUGUUGGCACUUACCACGUCUGAGCACUGACGGGCUACGGUUAAGUGAGCAAGAGCAAAUAGCAACAUUAGAGGUAGAAUAUCUAUUUGAAUUUUCUUUCAGCAAGACGAAGUGACAAGCUACGGUUGAGUGAGCAAGAGCAAAUAGCAGCAUCAGAGCAAGACGGAGUUCAGGAUCAUCUUUUUUAUCAGCAAGACGCACUUUUUUGGGUACUGUUGCUGUGGUGCGAUGUCUCUGGGUACUGUUGUGGAUGAUACUCUGACUCUUGCUGUGGUGCGAUAUGUCUCGGAUGGGAUGAUACUCUGACUCGGAUCUAUUGCUGUGGGUGGUGCAUUACGGAUACUCUGGGCCUGUUUGGCACAGCUCUAGCUCCAGCUCCACCCCUCCUGGAGCUGGAGCUCAGCCAAACAGUUUCAGCUCCACCAAAACUGGGAGUGGAGUUGGGUGGAGCUCUCUCACAAAAUGUACUAGAGUUGUGGAGCUGGGUUUAGGCAGCUCCACAACUUCACUCCAGACUCAACUCCUAGAGUUAUAUUUAGGAGUUGGAGCUGUACCAAACAGGCCCUCUGACUCGACAUGUUGUCGCGGUGCUGUAGUGGUGCAUUACGGAAUACGGAUAUACUCGUAGUUUCGACCUUGAUUGCCGUAGUGCUGCUACUAGUCAGUCCGGUUUCCAGCUGUUAAUACAGUGGGCGUUCUUUUCAUACAACCUGAAGAAAAGCACGGCUGGUCCACUAAUUUUGAUCGAUUUUUUAUGCAACCCCUUUUGAUUGAUUUUGGGAUA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
92.48%
ME_num:
MEP:
5.49%
HE_num:
HEP:
1.83%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
spikelet
Tau :
0.94
Avg Expression:
4.38
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // Paclobutrazol (PB) | -8.0599619581021 | 2.82856757953555e-06 |
2 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // gibberellic acid (GA) | -8.13771732966412 | 4.02991164744855e-06 |