Chr:
Chr2
Start:
605748
End:
609214
Strand:
+
Ref_name:
LOC107279935
Sequence
(XR_001542998.2):
GGGAAAAGAGAGCAAGACUGAGUACUACCCACUGUACUCAGCAAGUCAUACCGGAAGAGGAGGUUAUCUUCAUAUGUUUCAAUUGGCUCCACUCUUGGUGUAUGAUGCUUUCACAAGAACAACAGGAUACUAUGCGCAAUGGUGCUACACGCUUGGAAUUAGCAGUCAAGUAACUUUUAUUCCAGUUUGGAUGGCGUAGUACCUAUAGAAUUUCGUGAUAAAAUCUACGUGAUUUUGAAAAAAAUAUUAUUUUAGUAGAUCAUAUCAUCGGCAGAAGUUGGGGGUUUGUCCCAUCUCGCUUUUUUUAACUUUUCUGUGCACGUCUGAAUUUUUUGGCUGUGUGCCUACGGGCAGAGGCCGGAGAUGUAACCCAUUUCCAUUAUCUAAAAAAUUGUUACUUUCAUUAAUCAUUUACUAGGCAGUGCCGAUUGUUUGGAUGA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
38.21%
ME_num:
MEP:
61.38%
HE_num:
HEP:
0.2%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.84
Avg Expression:
6.25
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | -2.89312233314355 | 0.00707538519830567 |