Chr:
Chr12
Start:
21803116
End:
21807045
Strand:
-
Ref_name:
LOC107277451
Sequence
(XR_001542048.2):
AGAAUUACCGUGUGUUGGUGAGUUACACCAGGGAACGUCAGACGCCAUCCAUCCGAUGCAGCACGUUGACCAGUGGGACUAGCGGUGAGGGAAAACUUACCGAGUCUCAUCAUAUAAAGGAACUCGGGAACCAUUCGAUAUGAACAUGUGAAGAAACCGGGGCCCACCUGCCAGUUAAUUGUGUACAUCGGAUGGAGAUCCAACGAUCUAAAUUUGCUUGCCCUUUCAUAUAUAAAUUCCGAACCCUAGCACCCUCACCAACCCCUUUCUCCUCCCACUCUCAGCCGCCACCCCCAUUCGCCUGCUCUCCCGAACCACCGCAGCCUCCUCCCGCUCGCCGCUCCUCAAGCUGCAACGAGGACCAACGCCUACGCCACCUUCUCGAGCUAUAGCUGUGGCCGGCAUCGACGCCGGUGCCUCCUCCUCUUUUCCCCAACCAACGCCGGUGUAGCACCGGUCCGCGUCCUUUUCCCUCAACCUGGGAUCCUAGAUCUGUUGCGCGGCCGUCCCCUCGUCAAGUCGGAUGGCCUGAACCUCCGCCGUGGCUCCUCCUCAAGCCGGAUGCCAUGGAUCUACCGCGACCGGCCCCCUCAUCAAGCAACCCAACCGAGAUCCGCCAUGGUCGCCUCCUGGCCAUGCAAGGUUAUUGGAGAUUAUUAGUUGACUCAAUUAGUGGCUUGGGCACAAGCUUUAAUGCGCUUGCAUAGACAGGUGGAUCCACGGUAGUAGCCGAGCAUUCUUAGCCGUGCAGCAGAGGGUGGUGCCAAAGCCUGAGCUCUGGGAUGAUGCAGUGAUUUGGGAAAAACAAGCAGUUUGCUCCUGGAAGCAUACUUCUGUAGGUUCAAGCAUAUCUAUACUUAGUAGGGCUGAACUUGUUCACAAAUUCAAAGAUAUGAUCAACGUGAGGCUUAUGGGAGCUUCCCCAAUGGAUAAAUUUAGGUGAUUGCCCUUGGAUCUCAGUGGGUUAUGGUCUCCAAGACUCCAACAAGCCAACUUGAUCAUGAUUCUUGUGUGUUGCAUUCUUGAUAGAGUUCAGGAUGGUGCUUCAACUAUGAAGAGCUUAAGCUGUUUUUUGCGGUUUUCUUAGGAUUCUGUAGGACUAGUACAUUGUUUCAUGCUUAGAUCGAGAUGUAUGUUGAAUAUUUCUUCUUUUUAUUACAUUUGCAUGUCAAUCAAUAUAACAUACUGAUGGAAUACUUUACCUUGUUGAAUGUAUUUAUGCUCUAACAGGUUUAUUGCAAGUUGAUUAAGAUUUCAUCUACACACUGUUAGUGUCCCUCAACUAGCAAAUGCAUAUAUUUUUUAAAAAAUGGUUCUAUUAGUGCUUCCCGAGUGGUGCAAGCAAAAGGACACGCGGUAAUGAUUUUUGAUAUUACAGAGUGGCAGCUAAGAACACACCGUAACGUGCUGUUGACGUGGCUAUACCCGUUAUGUCCACGUGUCAAUAUAUAAAACUCGGGAAGCUCAGUGUCUCCGUUUGGAUAGUCAUCAUGCCGUUAGUGGAACUUUGCAGAGUGUAUUGUAGACACUCCGUAACCUCCCAACUGUUACGGAGUGUUUUUUCAGAAAACACACCGAAAGACAGCACGGGAACCUCGUAUCACUCCCGGGCGUGCUGUACCACUCUGCAACAUUAUUACUGGGUGUUUGAAGUAGUUACCUAGCGUCCUGGCAUUGUUACCGAGUGUUUUCGACACUAGGGAGCCUCUCCCAUCCUAGUAGUGCAGGCUUAUUAGUGAACAUCCAAAAACCACUGCACAAGCUUGGCAUAGGAUUAUGAACCGAUGCUCAGUCGCAGAGAGUUUGCACACAAGAAUGCAAACAACGGGAGAUACUCAGUCGCAGACUCGCAGCAUGCAAGAUGCUAAACAAAACCUCCUGCAGCCGCUGCAUCGCCUUCUCCGCUGUGAAAAAUGAUCUUUCUGCCAGCAUAAGUUUCUGAACAUCCAGCAGAUGGCACUCAGGAUGAAGGUAACAGAUUGGAAGUAUUUAUAGUAGCUCUGAUACCUUCCAUGCCCACACUGUUUGUGUUUGUUUUCAUGUAUGACAAAUAGAUUUUGCUCUUUGCUGGAAGCGAGAUUCCACACUUUCUUCAUCAACUCUCACUGUCUCAAUAUGCAUAUAUGCUCAAAUCUGUUGCCUGUUGCCUCAAAUUUAUAUGCUGAUCAGCAUCGAAUGGACACGUAAUCUUACAGAAAAAAAAAUCGAAUGUACGUAUAUGGUACUCGGAAGAGAGAGGCCAGGAGUGCUUCGAUGAUUUUGUAUUGUAUAUUUGUAUUGGAUAGGUUUAAAUAGGCCUGGACAACCAUGGUUAAUUGGUUAAUUUGUAUUGGAUGUUCCGGUCUAAGCUCUUUGAUGAAUAACGCAAAACUCAUUGUGACGAGGUCAAGACUCCAGACAAAUGUUUAUGACUUCAACUGGAUAUUUCUAUCAAUUUCUCCAACAUUGUAGUUUCAAAUUUCAA
Sequence
(XR_001542047.2):
AGAAUUACCGUGUGUUGGUGAGUUACACCAGGGAACGUCAGACGCCAUCCAUCCGAUGCAGCACGUUGACCAGUGGGACUAGCGGUGAGGGAAAACUUACCGAGUCUCAUCAUAUAAAGGAACUCGGGAACCAUUCGAUAUGAACAUGUGAAGAAACCGGGGCCCACCUGCCAGUUAAUUGUGUACAUCGGAUGGAGAUCCAACGAUCUAAAUUUGCUUGCCCUUUCAUAUAUAAAUUCCGAACCCUAGCACCCUCACCAACCCCUUUCUCCUCCCACUCUCAGCCGCCACCCCCAUUCGCCUGCUCUCCCGAACCACCGCAGCCUCCUCCCGCUCGCCGCUCCUCAAGCUGCAACGAGGACCAACGCCUACGCCACCUUCUCGAGCUAUAGCUGUGGCCGGCAUCGACGCCGGUGCCUCCUCCUCUUUUCCCCAACCAACGCCGGUGUAGCACCGGUCCGCGUCCUUUUCCCUCAACCUGGGAUCCUAGAUCUGUUGCGCGGCCGUCCCCUCGUCAAGUCGGAUGGCCUGAACCUCCGCCGUGGCUCCUCCUCAAGCCGGAUGCCAUGGAUCUACCGCGACCGGCCCCCUCAUCAAGCAACCCAACCGAGAUCCGCCAUGGUCGCCUCCUGGCCAUGCAAGGUUAUUGGAGAUUAUUAGUUGACUCAAUUAGUGGCUUGGGCACAAGCUUUAAUGCGCUUGCAUAGACAGGUGGAUCCACGGUAGUAGCCGAGCAUUCUUAGCCGUGCAGCAGAGGGUGGUGCCAAAGCCUGAGCUCUGGGAUGAUGCAGUGAUUUGGGAAAAACAAGUUUGCUCCUGGAAGCAUACUUCUGUAGGUUCAAGCAUAUCUAUACUUAGUAGGGCUGAACUUGUUCACAAAUUCAAAGAUAUGAUCAACGUGAGGCUUAUGGGAGCUUCCCCAAUGGAUAAAUUUAGGUGAUUGCCCUUGGAUCUCAGUGGGUUAUGGUCUCCAAGACUCCAACAAGCCAACUUGAUCAUGAUUCUUGUGUGUUGCAUUCUUGAUAGAGUUCAGGAUGGUGCUUCAACUAUGAAGAGCUUAAGCUGUUUUUUGCGGUUUUCUUAGGAUUCUGUAGGACUAGUACAUUGUUUCAUGCUUAGAUCGAGAUGUAUGUUGAAUAUUUCUUCUUUUUAUUACAUUUGCAUGUCAAUCAAUAUAACAUACUGAUGGAAUACUUUACCUUGUUGAAUGUAUUUAUGCUCUAACAGGUUUAUUGCAAGUUGAUUAAGAUUUCAUCUACACACUGUUAGUGUCCCUCAACUAGCAAAUGCAUAUAUUUUUUAAAAAAUGGUUCUAUUAGUGCUUCCCGAGUGGUGCAAGCAAAAGGACACGCGGUAAUGAUUUUUGAUAUUACAGAGUGGCAGCUAAGAACACACCGUAACGUGCUGUUGACGUGGCUAUACCCGUUAUGUCCACGUGUCAAUAUAUAAAACUCGGGAAGCUCAGUGUCUCCGUUUGGAUAGUCAUCAUGCCGUUAGUGGAACUUUGCAGAGUGUAUUGUAGACACUCCGUAACCUCCCAACUGUUACGGAGUGUUUUUUCAGAAAACACACCGAAAGACAGCACGGGAACCUCGUAUCACUCCCGGGCGUGCUGUACCACUCUGCAACAUUAUUACUGGGUGUUUGAAGUAGUUACCUAGCGUCCUGGCAUUGUUACCGAGUGUUUUCGACACUAGGGAGCCUCUCCCAUCCUAGUAGUGCAGGCUUAUUAGUGAACAUCCAAAAACCACUGCACAAGCUUGGCAUAGGAUUAUGAACCGAUGCUCAGUCGCAGAGAGUUUGCACACAAGAAUGCAAACAACGGGAGAUACUCAGUCGCAGACUCGCAGCAUGCAAGAUGCUAAACAAAACCUCCUGCAGCCGCUGCAUCGCCUUCUCCGCUGUGAAAAAUGAUCUUUCUGCCAGCAUAAGUUUCUGAACAUCCAGCAGAUGGCACUCAGGAUGAAGGUAACAGAUUGGAAGUAUUUAUAGUAGCUCUGAUACCUUCCAUGCCCACACUGUUUGUGUUUGUUUUCAUGUAUGACAAAUAGAUUUUGCUCUUUGCUGGAAGCGAGAUUCCACACUUUCUUCAUCAACUCUCACUGUCUCAAUAUGCAUAUAUGCUCAAAUCUGUUGCCUGUUGCCUCAAAUUUAUAUGCUGAUCAGCAUCGAAUGGACACGUAAUCUUACAGAAAAAAAAAUCGAAUGUACGUAUAUGGUACUCGGAAGAGAGAGGCCAGGAGUGCUUCGAUGAUUUUGUAUUGUAUAUUUGUAUUGGAUAGGUUUAAAUAGGCCUGGACAACCAUGGUUAAUUGGUUAAUUUGUAUUGGAUGUUCCGGUCUAAGCUCUUUGAUGAAUAACGCAAAACUCAUUGUGACGAGGUCAAGACUCCAGACAAAUGUUUAUGACUUCAACUGGAUAUUUCUAUCAAUUUCUCCAACAUUGUAGUUUCAAAUUUCAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
81.5%
ME_num:
MEP:
18.29%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
panicle
Tau :
0.78
Avg Expression:
1.15
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN | 1.39719210690016 | 0.0413704070575618 |
2 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // gibberellic acid (GA) | 6.63924544031137 | 0.015784608814211 |
3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | 1.34219389211895 | 0.0272281683566586 |
4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hA | 1.42586145505306 | 0.0339085573002466 |