OSA-PHAS107277451


Function Link


Basic Info

Chr:

Chr12

Start:

21803116

End:

21807045

Strand:

-

Ref_name:

LOC107277451

Sequence
(XR_001542048.2):

AGAAUUACCGUGUGUUGGUGAGUUACACCAGGGAACGUCAGACGCCAUCCAUCCGAUGCAGCACGUUGACCAGUGGGACUAGCGGUGAGGGAAAACUUACCGAGUCUCAUCAUAUAAAGGAACUCGGGAACCAUUCGAUAUGAACAUGUGAAGAAACCGGGGCCCACCUGCCAGUUAAUUGUGUACAUCGGAUGGAGAUCCAACGAUCUAAAUUUGCUUGCCCUUUCAUAUAUAAAUUCCGAACCCUAGCACCCUCACCAACCCCUUUCUCCUCCCACUCUCAGCCGCCACCCCCAUUCGCCUGCUCUCCCGAACCACCGCAGCCUCCUCCCGCUCGCCGCUCCUCAAGCUGCAACGAGGACCAACGCCUACGCCACCUUCUCGAGCUAUAGCUGUGGCCGGCAUCGACGCCGGUGCCUCCUCCUCUUUUCCCCAACCAACGCCGGUGUAGCACCGGUCCGCGUCCUUUUCCCUCAACCUGGGAUCCUAGAUCUGUUGCGCGGCCGUCCCCUCGUCAAGUCGGAUGGCCUGAACCUCCGCCGUGGCUCCUCCUCAAGCCGGAUGCCAUGGAUCUACCGCGACCGGCCCCCUCAUCAAGCAACCCAACCGAGAUCCGCCAUGGUCGCCUCCUGGCCAUGCAAGGUUAUUGGAGAUUAUUAGUUGACUCAAUUAGUGGCUUGGGCACAAGCUUUAAUGCGCUUGCAUAGACAGGUGGAUCCACGGUAGUAGCCGAGCAUUCUUAGCCGUGCAGCAGAGGGUGGUGCCAAAGCCUGAGCUCUGGGAUGAUGCAGUGAUUUGGGAAAAACAAGCAGUUUGCUCCUGGAAGCAUACUUCUGUAGGUUCAAGCAUAUCUAUACUUAGUAGGGCUGAACUUGUUCACAAAUUCAAAGAUAUGAUCAACGUGAGGCUUAUGGGAGCUUCCCCAAUGGAUAAAUUUAGGUGAUUGCCCUUGGAUCUCAGUGGGUUAUGGUCUCCAAGACUCCAACAAGCCAACUUGAUCAUGAUUCUUGUGUGUUGCAUUCUUGAUAGAGUUCAGGAUGGUGCUUCAACUAUGAAGAGCUUAAGCUGUUUUUUGCGGUUUUCUUAGGAUUCUGUAGGACUAGUACAUUGUUUCAUGCUUAGAUCGAGAUGUAUGUUGAAUAUUUCUUCUUUUUAUUACAUUUGCAUGUCAAUCAAUAUAACAUACUGAUGGAAUACUUUACCUUGUUGAAUGUAUUUAUGCUCUAACAGGUUUAUUGCAAGUUGAUUAAGAUUUCAUCUACACACUGUUAGUGUCCCUCAACUAGCAAAUGCAUAUAUUUUUUAAAAAAUGGUUCUAUUAGUGCUUCCCGAGUGGUGCAAGCAAAAGGACACGCGGUAAUGAUUUUUGAUAUUACAGAGUGGCAGCUAAGAACACACCGUAACGUGCUGUUGACGUGGCUAUACCCGUUAUGUCCACGUGUCAAUAUAUAAAACUCGGGAAGCUCAGUGUCUCCGUUUGGAUAGUCAUCAUGCCGUUAGUGGAACUUUGCAGAGUGUAUUGUAGACACUCCGUAACCUCCCAACUGUUACGGAGUGUUUUUUCAGAAAACACACCGAAAGACAGCACGGGAACCUCGUAUCACUCCCGGGCGUGCUGUACCACUCUGCAACAUUAUUACUGGGUGUUUGAAGUAGUUACCUAGCGUCCUGGCAUUGUUACCGAGUGUUUUCGACACUAGGGAGCCUCUCCCAUCCUAGUAGUGCAGGCUUAUUAGUGAACAUCCAAAAACCACUGCACAAGCUUGGCAUAGGAUUAUGAACCGAUGCUCAGUCGCAGAGAGUUUGCACACAAGAAUGCAAACAACGGGAGAUACUCAGUCGCAGACUCGCAGCAUGCAAGAUGCUAAACAAAACCUCCUGCAGCCGCUGCAUCGCCUUCUCCGCUGUGAAAAAUGAUCUUUCUGCCAGCAUAAGUUUCUGAACAUCCAGCAGAUGGCACUCAGGAUGAAGGUAACAGAUUGGAAGUAUUUAUAGUAGCUCUGAUACCUUCCAUGCCCACACUGUUUGUGUUUGUUUUCAUGUAUGACAAAUAGAUUUUGCUCUUUGCUGGAAGCGAGAUUCCACACUUUCUUCAUCAACUCUCACUGUCUCAAUAUGCAUAUAUGCUCAAAUCUGUUGCCUGUUGCCUCAAAUUUAUAUGCUGAUCAGCAUCGAAUGGACACGUAAUCUUACAGAAAAAAAAAUCGAAUGUACGUAUAUGGUACUCGGAAGAGAGAGGCCAGGAGUGCUUCGAUGAUUUUGUAUUGUAUAUUUGUAUUGGAUAGGUUUAAAUAGGCCUGGACAACCAUGGUUAAUUGGUUAAUUUGUAUUGGAUGUUCCGGUCUAAGCUCUUUGAUGAAUAACGCAAAACUCAUUGUGACGAGGUCAAGACUCCAGACAAAUGUUUAUGACUUCAACUGGAUAUUUCUAUCAAUUUCUCCAACAUUGUAGUUUCAAAUUUCAA

Sequence
(XR_001542047.2):

AGAAUUACCGUGUGUUGGUGAGUUACACCAGGGAACGUCAGACGCCAUCCAUCCGAUGCAGCACGUUGACCAGUGGGACUAGCGGUGAGGGAAAACUUACCGAGUCUCAUCAUAUAAAGGAACUCGGGAACCAUUCGAUAUGAACAUGUGAAGAAACCGGGGCCCACCUGCCAGUUAAUUGUGUACAUCGGAUGGAGAUCCAACGAUCUAAAUUUGCUUGCCCUUUCAUAUAUAAAUUCCGAACCCUAGCACCCUCACCAACCCCUUUCUCCUCCCACUCUCAGCCGCCACCCCCAUUCGCCUGCUCUCCCGAACCACCGCAGCCUCCUCCCGCUCGCCGCUCCUCAAGCUGCAACGAGGACCAACGCCUACGCCACCUUCUCGAGCUAUAGCUGUGGCCGGCAUCGACGCCGGUGCCUCCUCCUCUUUUCCCCAACCAACGCCGGUGUAGCACCGGUCCGCGUCCUUUUCCCUCAACCUGGGAUCCUAGAUCUGUUGCGCGGCCGUCCCCUCGUCAAGUCGGAUGGCCUGAACCUCCGCCGUGGCUCCUCCUCAAGCCGGAUGCCAUGGAUCUACCGCGACCGGCCCCCUCAUCAAGCAACCCAACCGAGAUCCGCCAUGGUCGCCUCCUGGCCAUGCAAGGUUAUUGGAGAUUAUUAGUUGACUCAAUUAGUGGCUUGGGCACAAGCUUUAAUGCGCUUGCAUAGACAGGUGGAUCCACGGUAGUAGCCGAGCAUUCUUAGCCGUGCAGCAGAGGGUGGUGCCAAAGCCUGAGCUCUGGGAUGAUGCAGUGAUUUGGGAAAAACAAGUUUGCUCCUGGAAGCAUACUUCUGUAGGUUCAAGCAUAUCUAUACUUAGUAGGGCUGAACUUGUUCACAAAUUCAAAGAUAUGAUCAACGUGAGGCUUAUGGGAGCUUCCCCAAUGGAUAAAUUUAGGUGAUUGCCCUUGGAUCUCAGUGGGUUAUGGUCUCCAAGACUCCAACAAGCCAACUUGAUCAUGAUUCUUGUGUGUUGCAUUCUUGAUAGAGUUCAGGAUGGUGCUUCAACUAUGAAGAGCUUAAGCUGUUUUUUGCGGUUUUCUUAGGAUUCUGUAGGACUAGUACAUUGUUUCAUGCUUAGAUCGAGAUGUAUGUUGAAUAUUUCUUCUUUUUAUUACAUUUGCAUGUCAAUCAAUAUAACAUACUGAUGGAAUACUUUACCUUGUUGAAUGUAUUUAUGCUCUAACAGGUUUAUUGCAAGUUGAUUAAGAUUUCAUCUACACACUGUUAGUGUCCCUCAACUAGCAAAUGCAUAUAUUUUUUAAAAAAUGGUUCUAUUAGUGCUUCCCGAGUGGUGCAAGCAAAAGGACACGCGGUAAUGAUUUUUGAUAUUACAGAGUGGCAGCUAAGAACACACCGUAACGUGCUGUUGACGUGGCUAUACCCGUUAUGUCCACGUGUCAAUAUAUAAAACUCGGGAAGCUCAGUGUCUCCGUUUGGAUAGUCAUCAUGCCGUUAGUGGAACUUUGCAGAGUGUAUUGUAGACACUCCGUAACCUCCCAACUGUUACGGAGUGUUUUUUCAGAAAACACACCGAAAGACAGCACGGGAACCUCGUAUCACUCCCGGGCGUGCUGUACCACUCUGCAACAUUAUUACUGGGUGUUUGAAGUAGUUACCUAGCGUCCUGGCAUUGUUACCGAGUGUUUUCGACACUAGGGAGCCUCUCCCAUCCUAGUAGUGCAGGCUUAUUAGUGAACAUCCAAAAACCACUGCACAAGCUUGGCAUAGGAUUAUGAACCGAUGCUCAGUCGCAGAGAGUUUGCACACAAGAAUGCAAACAACGGGAGAUACUCAGUCGCAGACUCGCAGCAUGCAAGAUGCUAAACAAAACCUCCUGCAGCCGCUGCAUCGCCUUCUCCGCUGUGAAAAAUGAUCUUUCUGCCAGCAUAAGUUUCUGAACAUCCAGCAGAUGGCACUCAGGAUGAAGGUAACAGAUUGGAAGUAUUUAUAGUAGCUCUGAUACCUUCCAUGCCCACACUGUUUGUGUUUGUUUUCAUGUAUGACAAAUAGAUUUUGCUCUUUGCUGGAAGCGAGAUUCCACACUUUCUUCAUCAACUCUCACUGUCUCAAUAUGCAUAUAUGCUCAAAUCUGUUGCCUGUUGCCUCAAAUUUAUAUGCUGAUCAGCAUCGAAUGGACACGUAAUCUUACAGAAAAAAAAAUCGAAUGUACGUAUAUGGUACUCGGAAGAGAGAGGCCAGGAGUGCUUCGAUGAUUUUGUAUUGUAUAUUUGUAUUGGAUAGGUUUAAAUAGGCCUGGACAACCAUGGUUAAUUGGUUAAUUUGUAUUGGAUGUUCCGGUCUAAGCUCUUUGAUGAAUAACGCAAAACUCAUUGUGACGAGGUCAAGACUCCAGACAAAUGUUUAUGACUUCAACUGGAUAUUUCUAUCAAUUUCUCCAACAUUGUAGUUUCAAAUUUCAA


Expression Capacity

HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.

HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.


NE_num:

1

NEP:

0.2%

LE_num:

401

LEP:

81.5%

ME_num:

90

MEP:

18.29%

HE_num:

0

HEP:

0.0%


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Type:

MCR ()


Tissue Specific Expression

cutoff: tau > 0.9 and Average expression in the tissue > 10


Tissue :

panicle

Tau :

0.78

Avg Expression:

1.15

Tip: OSA-PHAS107277451 is not a tissue-specific expression ncRNA.

Differential Expression

cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01


Num. Condition log2(FoldChange) Padj
1Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN1.397192106900160.0413704070575618
2IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // gibberellic acid (GA)6.639245440311370.015784608814211
3Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN1.342193892118950.0272281683566586
4Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hA1.425861455053060.0339085573002466