Chr:
Chr2
Start:
11057011
End:
11060302
Strand:
-
Ref_name:
LOC107276173
Sequence
(XM_015768498.2):
UCUUCCUCCUCUUCUUCUACCCUCUGUCCAUUGUAUCUGCAAUUCUGCAUUAAGCUUGAAAGACAGUAGGUACAGAGCUGUCUCUGUAGCUACUAGAUAGUCAUCCUCUUGUUGAACUUCAGUACUGAAAACAAGAUCUGAAUUUGUAUUUGUUUCCCAGGUUCCAUCUAUCACUUUAUGCAGUGAAAGUUUGUAACUACAGGAAAUUAAGGGCGUGGUUUGUAUAAAAUGGGCUGUGUAUCAUCAAAGCAGUUCAAAAGAGCUGCACAACAUGAGGAUCCUGCUAUUCUGGCCAAAGAGACUACAUUUUCAGUGAGUGAAGUGGAGGCCCUCUUUGAGCUGUUCAAGAAGAUAAGCCAUUCCAUAUUCAGAGAUGGUCUCAUUCACAAGGAGGAGUUCCAGCUAGCUCUCUUCAGGAACAGCAACAAGAAGAACCUUUUCGCCAAUCGGAUAUUUGAUCUCUUUGAUCUGAAGCGCAACGGUGUUAUCGAUUUCGGGGAGUUCGUUCGAUCCCUCAGCAUUUUUCACCCGGAAACGCCUUUGGGAGACAAGAUUGCCUUUGCAUUUAGGUUGUAUGACCUGAGAGGAACUGGAUGCAUUGAACGUGAAGAGUUGCACGAAAUGGUGCUUGCUCUUCUGAAUGAAUCAGAUCUAUUCCUAUCUGAAGAAGCUGUAGAACAAAUCGUGGAUCAGACGUUCAAGCAAGCAGACUUAAACGAUGACGGGAAGAUCGACCCCGAUGAAUGGAAAACGUUUGCGAGUAAAAACCCGGCUUUGCUGAAGAACAUGACUCUUCCAUACCUAAAGGACAUAACCAUGGUAUUCCCCAGCUUUAUUCUGAACUCUGAAGUUUGUGAGGAAGAGUUGUAACAUCCAUGGUACCCUCUGUGCUCCAUUUAUAUUUCUCACAAAGGGGCAUGACUACAUGGGGAAACCAUGGGAACAGAGCUAGAUGAAUCACAAUCAUCAGACAUGGGCACACAGUAUGCAGCAAUAGUGAAGACCUCAGCACUGAAGAACAGUAUGCAGGCUAAGGAUAAAAUGGUUCACCUGUACAUGACUGAUCUUCAGGUCACGAUGAUAUCUCUGAUGGAUCGCAGAAGUUGAGAUGCAUUGUGUUUGGGAGAGUUUCUGGCAGGGCUUGUUUGGCACAGCUCCAGCUCCAGCUCCACCCCUCCUAGAGCUCAGCCAAACAGUUUCAGCUCCACCAAAACUGGGAGUGGAGCUGGGUGGAACUCUCUCACAAAAUGAACUAGAGUUGUGGAGCUGGGUUUACGCAGCUCCACAACUCCACUCCAGACCCAACUCCUGGAGCUAAAUUUAGGAGUUGGAGUUGUACCAAACAGGCCCAUGACUUCUCCUGGAAUUUCCAGUUGCUAGAAGCCCCCCAAAACAGUCCAAAUUUUUAUCCAGAUUCUGAGAAGUUAUAGUUGUAGAAUCCAGAAAUUGAACUAGAAGCCAGAAGCUGAGUUUCCCAAAUUCUCCAGAUUCUUACCAACUGUUUCUCAAAAUCUUAAGCUCCCCAAACAUGGUAGGAUACCAUCAUGGUGCGUCGCAAUCUUGAGACAGUAGUCAUACACAUGCGCAUUUGUUGUGCAUGGAUGGAAAUUUUGUAGUAGGAUUUGUGCAAACUUAUUCCGAACUGAUCUUGUGACGAUUUUCAAGCUAUGUUUGAUGUCGCAUUUUCUUCAUUUAGCAAUGUUGUGUUACAGUUACAUAAUAAGUAAUGUCCAAAUGCAUAUUUAAUGUAGAAGU
Sequence
(XM_015768499.2):
UUCCUCCUCUUCUUCUACCCUCUGUCCAUUGUAUCUGCAAUUCUGCAUUAAGCUUGAAAGACAGUAGGUACAGAGCUGUCUCUGUAGCUACUAGAUAGUCAUCCUCUUGUUGAACUUCAGUACUGAAAACAAGAUCUGAAUUUGUAUUUGUUUCCCAGGAAAUUAAGGGCGUGGUUUGUAUAAAAUGGGCUGUGUAUCAUCAAAGCAGUUCAAAAGAGCUGCACAACAUGAGGAUCCUGCUAUUCUGGCCAAAGAGACUACAUUUUCAGUGAGUGAAGUGGAGGCCCUCUUUGAGCUGUUCAAGAAGAUAAGCCAUUCCAUAUUCAGAGAUGGUCUCAUUCACAAGGAGGAGUUCCAGCUAGCUCUCUUCAGGAACAGCAACAAGAAGAACCUUUUCGCCAAUCGGAUAUUUGAUCUCUUUGAUCUGAAGCGCAACGGUGUUAUCGAUUUCGGGGAGUUCGUUCGAUCCCUCAGCAUUUUUCACCCGGAAACGCCUUUGGGAGACAAGAUUGCCUUUGCAUUUAGGUUGUAUGACCUGAGAGGAACUGGAUGCAUUGAACGUGAAGAGUUGCACGAAAUGGUGCUUGCUCUUCUGAAUGAAUCAGAUCUAUUCCUAUCUGAAGAAGCUGUAGAACAAAUCGUGGAUCAGACGUUCAAGCAAGCAGACUUAAACGAUGACGGGAAGAUCGACCCCGAUGAAUGGAAAACGUUUGCGAGUAAAAACCCGGCUUUGCUGAAGAACAUGACUCUUCCAUACCUAAAGGACAUAACCAUGGUAUUCCCCAGCUUUAUUCUGAACUCUGAAGUUUGUGAGGAAGAGUUGUAACAUCCAUGGUACCCUCUGUGCUCCAUUUAUAUUUCUCACAAAGGGGCAUGACUACAUGGGGAAACCAUGGGAACAGAGCUAGAUGAAUCACAAUCAUCAGACAUGGGCACACAGUAUGCAGCAAUAGUGAAGACCUCAGCACUGAAGAACAGUAUGCAGGCUAAGGAUAAAAUGGUUCACCUGUACAUGACUGAUCUUCAGGUCACGAUGAUAUCUCUGAUGGAUCGCAGAAGUUGAGAUGCAUUGUGUUUGGGAGAGUUUCUGGCAGGGCUUGUUUGGCACAGCUCCAGCUCCAGCUCCACCCCUCCUAGAGCUCAGCCAAACAGUUUCAGCUCCACCAAAACUGGGAGUGGAGCUGGGUGGAACUCUCUCACAAAAUGAACUAGAGUUGUGGAGCUGGGUUUACGCAGCUCCACAACUCCACUCCAGACCCAACUCCUGGAGCUAAAUUUAGGAGUUGGAGUUGUACCAAACAGGCCCAUGACUUCUCCUGGAAUUUCCAGUUGCUAGAAGCCCCCCAAAACAGUCCAAAUUUUUAUCCAGAUUCUGAGAAGUUAUAGUUGUAGAAUCCAGAAAUUGAACUAGAAGCCAGAAGCUGAGUUUCCCAAAUUCUCCAGAUUCUUACCAACUGUUUCUCAAAAUCUUAAGCUCCCCAAACAUGGUAGGAUACCAUCAUGGUGCGUCGCAAUCUUGAGACAGUAGUCAUACACAUGCGCAUUUGUUGUGCAUGGAUGGAAAUUUUGUAGUAGGAUUUGUGCAAACUUAUUCCGAACUGAUCUUGUGACGAUUUUCAAGCUAUGUUUGAUGUCGCAUUUUCUUCAUUUAGCAAUGUUGUGUUACAGUUACAUAAUAAGUAAUGUCCAAAUGCAUAUUUAAUGUAGAAGU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
70.12%
ME_num:
MEP:
17.28%
HE_num:
HEP:
12.4%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
root
Tau :
0.96
Avg Expression:
34.36
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | 4.96043586044441 | 7.65870989067398e-08 |