Chr:
Chr9
Start:
22153074
End:
22154300
Strand:
+
Ref_name:
OSA-LNCN7888
Sequence
(OSA-LNCN7888.1):
AGUUCAGACUUCAAAGGUUUCAGGAAACCAAAUUACAAUGACAAAUGGACAACACUGAUUGUUAAUUCAGGGGUAAUUAAUUGAUAAAAAGGAUGAACAAGACUAAUUGUUGAUGCUCCUACUUGAUUUGAAAUAGGACACUCCAAAAUGUAAAUGAGGUGAUCAGGCACAUAUAGUUACCAAAUCUCAUUCCAGUAAUGUAAACUGCUUACUGAUGAAGGUCACUUAAAUAUGUCCAUGCUCGCCUUACUAGAAACUAUUGGGAACUUAUAUAUGAAGGUCACUUAUAGAUUAUUAGCCUUGCCAGAAAUUACCAAUGGUAACCUACUGGCCUGUGUAGAAGGGUUACUCUGACAGAUACACUACCUAAGAAACUGCAUGUUCAUCCACCAAAAACCAGAAAGAAACUGCCUGUUCCAUACUCUGUAUGAUUGAUAGGAAGAAACUUCAGAACCAACAUCUGGCUGUAACUCAGUACCCUCAGUGCAUCAAUAACAAUGUUCUAAAACAAGAUUUACAGGGCCGCACAAGGAACGGGAUCCUAACCUUGUACUGCUUAAGCCACACAAUAGGCCAGCUAUGCCAUGUAAGGCUGUAAGCACUGCAAUGCAGGUGACAACACAAUAGCCCUUGCCACCUUUUAGAAUCUUGAUAAUUGAAUGUCCUGCCUACUCUAGUACCACUUGUUCUACAGUCUACAGGUCGUAUGACUCAACUAACAGAAAAGGAAGCCAAGACAAAAUGUUCAGGGUCUCCAAAUUUUCUGGUGACUGCAAAAUUGACAGCCAUAACUUUAUUGAUCUAUAAUCUCUUUCUCCAUUU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
12.6%
ME_num:
MEP:
86.59%
HE_num:
HEP:
0.61%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
pistil
Tau :
0.53
Avg Expression:
2.61
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | -1.295812337068 | 0.0348338838132248 |
| 2 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | 1.23422787371203 | 0.00732612608635413 |