Chr:
Chr9
Start:
21770362
End:
21778322
Strand:
-
Ref_name:
OSA-LNCN7876
Sequence
(OSA-LNCN7876.1):
UACAUGAUUACCACUAAUCGCAGCAUAUGCGGCUAAUCACUAGCAACAACUAAAUCUCAUGUACAGCUAGGACCGAUUCACUCGGCUAAUACUGACCUUGUCUUGCUUGCAAUUCGGCUACUUCUCGCAGCACUCCACAUGCAGUUGAGCUUGGUCUUCAUGAACGUUGUUUGCUCCAUUCUCGCACCACCGCAUCGCACGGCACGUCGGCAUCUCGCCAAUGAGCUGGAGCCAAACUAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
62.8%
ME_num:
MEP:
35.77%
HE_num:
HEP:
1.22%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.93
Avg Expression:
9.42
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | -4.72513343494388 | 0.0216814722405271 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | -3.87676099435378 | 0.0461109430208328 |
| 3 | Nipponbare // shoot // "Control,22C for 10 min, then 30C for 1h50 min"--/--Nipponbare // shoot // "Heat,42C for 10 min, then 30C for 1h50 min" | 3.28987179953983 | 9.7835466124181e-11 |
| 4 | Nipponbare // shoot // "Control, 22C for 10 min, then 30C for 50 min"--/--Nipponbare // shoot // "Heat, 42C for 10 min, then 30C for 50 min" | 2.89271215189334 | 9.0349381688037e-08 |
| 5 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | -5.01654343415718 | 0.0131971796865824 |
| 6 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | -5.15619413219942 | 0.00809807134547456 |