Chr:
Chr9
Start:
17711936
End:
17712589
Strand:
-
Ref_name:
OSA-LNCN7802
Sequence
(OSA-LNCN7802.1):
GGGCAGCGGCUGAGCGCGGCGGCCUCGGCGCGGAGGCGGCGGCAGCGAGCGGCGGCAAGCGGCGGUGCGCGGGGGCGGACGCGGAGGCGGCGGCGGCGAGCGGCGGCCCGCGCGGUUGGCGGUGAGCGGCGGUGCACGGGGGCAGACGGGCGGCUCGGGUGCGCGGUGGCGGACGCGGAGGCGGCGGCGGCUAGCGGCGGCCCGCGCGGCUGGCGGCGAUGCGCGGGGGCGGACGGUCGGUGGGCGGCGGUGGCGGAGGUGGGGAUGUUGUAGACGGCGGCGCCCCCGCCUCUCUCUUCCCCUCUCUCUCUCACGGGCGGCGGCGCGAGCGACAGCGGCGGGCGCGGCUGGUGGAGGCCGACGGCGGACGGUCGGACGGCGCGCAGGGGCGGGUGGACGGAGCCUCCCAAUCCACCUCUAUCAUCGCCGCCCCUUCUCCUCCUCGCCGGAGAAGCUCGCCUCGGAUCCCUCCUCCUCCUCGUCGUCGUCGUCGGUGCUCGGCCCCCGCGCACAGCCGCUCGCCGCCGCCGCCUCCGCGUCCGCCCCCGUGCACCCGCGCCGCCCUUCCGCCCCCACGCACCGCCGCUCGCCGCCAGCCGCGCCCGCCGCCGCUCACCACCAGCCGCGCCGGCCGCCGCUCGCCGCCGCCGCCUC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
92.68%
ME_num:
MEP:
7.11%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
spikelet
Tau :
0.86
Avg Expression:
0.48
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | -1.59829653885667 | 0.0352561232767033 |