Chr:
Chr9
Start:
16796989
End:
16802927
Strand:
-
Ref_name:
OSA-LNCN7780
Sequence
(OSA-LNCN7780.1):
GUGGAGAUUAUGGGUACCCCAUACCCACAUGGCAUGGUUAUCCAACUAGUUAUAGGGGAUAACUUAUAUCUAUGAAAUAUGUAACAGAUCAUGACUUGGGUAUUACGUUUCUUUGUAUAUUAUGGAACGGCCUAAAGUCCUGGUUUGAUAAGAUUGUAAAGUAGAUUUAGGAAACCGAUACCGUCUUGGUUAAGGUUUCUAUCUUGUAACCCUGCCCCCCAACCUAUAUAAGGAGGGCAGGGAGCCCCCUCUAGGGGCAUGAGACAACUAGAUCGUC
Sequence
(OSA-LNCN7780.2):
GUUUCUAUCUUGUAACCCUGCCCCCCAACCUAUAUAAGGAGGGCAGGGAGCCCCCUCUAGGGGCAUGAGACAACUAGAUCGUCACAUCUAUAAUACACCCGGCGGAUUCAAAUCCCCAAACAGGAGUAGGGUAUUACCUCUCAUCGAGAGGGCCUGAACCUGUCUAAAUCCUUUGUUUCCACAUCCAUCCACUUUUAGGUCUCGUGCGCUACCCCGUUUUAUUAUUGCCGAAUUCAUGUUUCGACAGUUGGCGCGCCAGGUAGGGGUGCGUCGAGUUUCCCGUCGACGAGUGCGAUGGAACUAAUCUCCGGCGUCGCCGGAUUCGUCAAGCAUGUUCUUUUUGUCUCGGAUUCAGUCCAGCCAAAGGGAUUAGUCUCGGCGAUUUCAUCGAUUUAAUCUUUAAUAUCACUGGCUUUGCCGUUUCAGUAGUCAGAUUGUUUUCUAACGGCAGAUUAAUUUCCUGUUAUUCUCUUGAUUUUGCAUGCCGACUGAGAUCAAGAUCAAUGGCUGUCAUCUCGGCAUUCAUGUCUUCACCAACCGGUUGGACUUCGCCACCGCCGACUGGUGUUUCCGCCU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
89.63%
ME_num:
MEP:
8.94%
HE_num:
HEP:
1.22%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.99
Avg Expression:
1.77
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | 2.9195114338592 | 0.00215968021579771 |