Chr:
Chr9
Start:
15102133
End:
15106484
Strand:
+
Ref_name:
OSA-LNCN7753
Sequence
(OSA-LNCN7753.1):
UCGACCUCGCCUUAGCCCCGCCGUGCCUAAGCCCUAGCCCAGCUGGCGAGCUUAUCCUCUCCGCCUCACCUAUAAAAGGCCCCCAAGAGCCCCGAGCUCGUCCUCCCCUCUGAGCCUUUUCUACUCCCUCAAAAACAUUUCGUCGAACACCUUGUGGGCGUGCUGCACCUUCUUCUCCGCUCCACCACCGCAGCCGAUCUUCGUCAUUCUGCCGUCUCUCGAUAAACACAGAAGAUUUCCGAUUUCCAAAAUCGGGGGUCUACAAUCGAAGAUGAAGAUUGUCGCGGAAACAGAGUAAGAAUCGGCUGAAGUCCGGAUCGACUACGAUUGGAUCGGCUGAGUUGGAGUCAGACUUGGUUAGGUGAUGCAGCCGAUUCCAACAAUACGACUUGGUGUACGACAUCGGGUUGGGUUGAGGUGCUUCAAGAUGAUUGCCAUGCAUGGAUAGAGUUCUGGGAAGGCAAUUGUAUCUAUUAAUUAAGACAUUUUAUGUAAUUUUCUUAGAGAUAUGCUUGGGCAAAAGUCUGCCGUAAAGACUUGUGGUAUCUUAGAUUUUGUUAGAGAUAAUAGUCAUGUCUGGUAUGGACAUAUCUUGUAAUUCUCGGGUAUGAAUAGACCCCGAGCCCUAUGUAAUUAAACACACACGUUCAAUACAAUUUCGGCGCAUCGCCACCUUUUUGCUUUA
Sequence
(OSA-LNCN7753.2):
CCUCUCCGCCUCACCUAUAAAAGGCCCCCAAGAGCCCCGAGCUCGUCCUCCCCUCUGAGCCUUUUCUACUCCCUCAAAAACAUUUCGUCGAACACCUUGUGGGCGUGCUGCACCUUCUUCUCCGCUCCACCACCGCAGCCGAUCUUCGUCAUUCUGCCGUCUCUCGAAUUUGUGUAUCGGUUAGUCGUGAGGCAACGUAUGCAGCUUCCAGGAGGUGAAGGUUGAUCAAGAUUAUAUCAAUAAUAAGGACGAUUCUGAGCAGGGAUUGGUACAGAUAAACACAGAAGAUUUCCGAUUUCCAAAAUCGGGGGUCUACAAUCGAAGAUGAAGAUUGUCGCGGAAACAGAGUAAGAAUCGGCUGAAGUCCGGAUCGACUACGAUUGGAUCGGCUGAGUUGGAGUCAGACUUGGUUAGGUGAUGCAGCCGAUUCCAACAAUACGACUUGGUGUACGACAUCGGGUUGGGUUGAGGUGCUUCAAGAUGAUUGCCAUGCAUGGAUAGAGUUCUGGGAAGGCAAUUGUAUCUAUUAAUUAAGACAUUUUAUGUAAUUUUCUUAGAGAUAUGCUUGGGCAAAAGUCUGCCGUAAAGACUUGUGGUAUCUUAGAUUUUGUUAGAGAUAAUAGUCAUGUCUGGUAUGGACAUAUCUUGUAAUUCUCGGGUAUGAAUAGACCCCGAGCCCUAUGUAAUUAAACACACACGUUCAAUACAAUUUCGGCGCAUCGCCACCUUUUUGCUUUA
Sequence
(OSA-LNCN7753.3):
CCGAGCUCGUCCUCCCCUCUGAGCCUUUUCUACUCCCUCAAAAACAUUUCGUCGAACACCUUGUGGGCGUGCUGCACCUUCUUCUCCGCUCCACCACCGCAGCCGAUCUUCGUCAUUCUGCCGUCUCUCGGAGAGUGUUGAAGAGAAGCCCUUGUCGGUACGCUUGCGUAUCCAACAAGAUGAUCAGAGUGCGGUCUUGUUCUAGGUCUCGUCCCCCAGUCGACUGCCUGUGGCAUGUUAACCGGGCCCUUAUAUUAUUUUGUCUUCCGCUGCUGUUCUCUGGUAGUUGUUGGCCUACCUGGCCCUAAUGGAUUGGUACAGAUAAACACAGAAGAUUUCCGAUUUCCAAAAUCGGGGGUCUACAAUCGAAGAUGAAGAUUGUCGCGGAAACAGAGUAAGAAUCGGCUGAAGUCCGGAUCGACUACGAUUGGAUCGGCUGAGUUGGAGUCAGACUUGGUUAGGUGAUGCAGCCGAUUCCAACAAUACGACUUGGUGUACGACAUCGGGUUGGGUUGAGGUGCUUCAAGAUGAUUGCCAUGCAUGGAUAGAGUUCUGGGAAGGCAAUUGUAUCUAUUAAUUAAGACAUUUUAUGUAAUUUUCUUAGAGAUAUGCUUGGGCAAAAGUCUGCCGUAAAGACUUGUGGUAUCUUAGAUUUUGUUAGAGAUAAUAGUCAUGUCUGGUAUGGACAUAUCUUGUAAUUCUCGGGUAUGAAUAGACCCCGAGCCCUAUGUAAUUAAACACACACGUUCAAUACAAUUUCGGCGCAUCGCCACCUUUUUGCUUUA
Sequence
(OSA-LNCN7753.4):
GAGCCUUUUCUACUCCCUCAAAAACAUUUCGUCGAACACCUUGUGGGCGUGCUGCACCUUCUUCUCCGCUCCACCACCGCAGCCGAUCUUCGUCAUUCUGCCGUCUCUCGGAGAGUGUUGAAGAGAAGCCCUUGUCGGUACGCUUGCGUAUCCAACAAGAUGAUCAGAGUGCGGUCUUGUUCUAGGUCUCGUCCCCCAGUCGACUGCCUGUGGCAUGUUAACCGGGCCCUUAUAUUAUUUUGUCUUCCGCUGCUGUUCUCUGGUAGUUGUUGGCCUACCUGGCCCUAAUAUAAACACAGAAGAUUUCCGAUUUCCAAAAUCGGGGGUCUACAAUCGAAGAUGAAGAUUGUCGCGGAAACAGAGUAAGAAUCGGCUGAAGUCCGGAUCGACUACGAUUGGAUCGGCUGAGUUGGAGUCAGACUUGGUUAGGUGAUGCAGCCGAUUCCAACAAUACGACUUGGUGUACGACAUCGGGUUGGGUUGAGGUGCUUCAAGAUGAUUGCCAUGCAUGGAUAGAGUUCUGGGAAGGCAAUUGUAUCUAUUAAUUAAGACAUUUUAUGUAAUUUUCUUAGAGAUAUGCUUGGGCAAAAGUCUGCCGUAAAGACUUGUGGUAUCUUAGAUUUUGUUAGAGAUAAUAGUCAUGUCUGGUAUGGACAUAUCUUGUAAUUCUCGGGUAUGAAUAGACCCCGAGCCCUAUGUAAUUAAACACACACGUUCAAUACAAUUUCGGCGCAUCGCCACCUUUUUGCUUUA
Sequence
(OSA-LNCN7753.5):
CUUUUCUACUCCCUCAAAAACAUUUCGUCGAACACCUUGUGGGCGUGCUGCACCUUCUUCUCCGCUCCACCACCGCAGCCGAUCUUCGUCAUUCUGCCGUCUCUCGAAUUUGUGUAUCGGUUAGUCGUGAGGCAACGUAUGCAGCUUCCAGGAGGUGAAGGUUGAUCAAGAUUAUAUCAAUAAUAAGGACGAUUCUGAGCAGGAGAGUGUUGAAGAGAAGCCCUUGUCGGUACGCUUGCGUAUCCAACAAGAUGAUCAGAGUGCGGUCUUGUUCUAGGUCUCGUCCCCCAGUCGACUGCCUGUGGCAUGUUAACCGGGCCCUUAUAUUAUUUUGUCUUCCGCUGCUGUUCUCUGGUAGUUGUUGGCCUACCUGGCCCUAAUAAGAUUUCCGAUUUCCAAAAUCGGGGGUCUACAAUCGAAGAUGAAGAUUGUCGCGGAAACAGAGUAAGAAUCGGCUGAAGUCCGGAUCGACUACGAUUGGAUCGGCUGAGUUGGAGUCAGACUUGGUUAGGUGAUGCAGCCGAUUCCAACAAUACGACUUGGUGUACGACAUCGGGUUGGGUUGAGGUGCUUCAAGAUGAUUGCCAUGCAUGGAUAGAGUUCUGGGAAGGCAAUUGUAUCUAUUAAUUAAGACAUUUUAUGUAAUUUUCUUAGAGAUAUGCUUGGGCAAAAGUCUGCCGUAAAGACUUGUGGUAUCUUAGAUUUUGUUAGAGAUAAUAGUCAUGUCUGGUAUGGACAUAUCUUGUAAUUCUCGGGUAUGAAUAGACCCCGAGCCCUAUGUAAUUAAACACACACGUUCAAUACAAUUUCGGCGCAUCGCCACCUUUUUGCUUUA
Sequence
(OSA-LNCN7753.6):
UUCGUCGAACACCUUGUGGGCGUGCUGCACCUUCUUCUCCGCUCCACCACCGCAGCCGAUCUUCGUCAUUCUGCCGUCUCUCGAAGAUUUCCGAUUUCCAAAAUCGGGGGUCUACAAUCGAAGAUGAAGAUUGUCGCGGAAACAGAGUAAGAAUCGGCUGAAGUCCGGAUCGACUACGAUUGGAUCGGCUGAGUUGGAGUCAGACUUGGUUAGGUGAUGCAGCCGAUUCCAACAAUACGACUUGGUGUACGACAUCGGGUUGGGUUGAGGUGCUUCAAGAUGAUUGCCAUGCAUGGAUAGAGUUCUGGGAAGGCAAUUGUAUCUAUUAAUUAAGACAUUUUAUGUAAUUUUCUUAGAGAUAUGCUUGGGCAAAAGUCUGCCGUAAAGACUUGUGGUAUCUUAGAUUUUGUUAGAGAUAAUAGUCAUGUCUGGUAUGGACAUAUCUUGUAAUUCUCGGGUAUGAAUAGACCCCGAGCCCUAUGUAAUUAAACACACACGUUCAAUACAAUUUCGGCGCAUCGCCACCUUUUUGCUUUA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
50.0%
ME_num:
MEP:
40.45%
HE_num:
HEP:
9.35%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
flower
Tau :
0.96
Avg Expression:
29.19
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Vialone_Nano // leaf // control--/--Vialone_Nano // leaf // 100 mM NaCl | -1.71859461031367 | 0.0122661387788125 |
| 2 | IR64 // panicle // Dawn--/--IR64 // panicle // Dawn + 17.5h | -3.05414336820972 | 0.0155965244275519 |
| 3 | Nipponbare // shoot // "Control,22C for 10 min, then 30C for 9h50 min"--/--Nipponbare // shoot // "Heat,42C for 10 min, then 30C for 9h50 min" | 1.90333018422531 | 0.0155543487371694 |
| 4 | Nipponbare // root // "mock,1_day"--/--Nipponbare // root // "auxin(50CM_2,4_D),1_day" | 2.3915651533204 | 0.00136932565280869 |
| 5 | Nipponbare // shoot // "Control, 22C for 10 min, then 30C for 50 min"--/--Nipponbare // shoot // "Heat, 42C for 10 min, then 30C for 50 min" | 1.75627651289964 | 0.0451226146517922 |
| 6 | BR-IRGA_409 // spikelet // control condition (29C) for 7 hrs--/--BR-IRGA_409 // spikelet // high temperature treatment (38C) for 7 hrs | 1.23572158585069 | 0.0128180431075461 |
| 7 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // Paclobutrazol (PB) | 6.65565246025518 | 0.0151406795262642 |
| 8 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // gibberellic acid (GA) | 8.88886273150862 | 1.5719227217895e-09 |
| 9 | Baldo // root // control--/--Baldo // root // 100 mM NaCl | -3.07903776970708 | 0.0115749097813202 |
| 10 | Nipponbare // shoot // No_DIS;_mock_inoculated--/--Nipponbare // shoot // No_DIS;Fr13_inoculated | -3.64133880328845 | 0.0490035134425794 |
| 11 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | 2.90975390275561 | 7.11970217052777e-18 |
| 12 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | 2.71545637758184 | 0.0400214491934162 |