Chr:
Chr9
Start:
10800139
End:
10800987
Strand:
-
Ref_name:
OSA-LNCN7665
Sequence
(OSA-LNCN7665.1):
AUAUAUACAUUCUUUAACUUUGCUUCGCCCUGCAGAAUGCUUGGAAUAACUGAUCAAAGAAGUUGCUAAUGAGCAGCUUAGCUAGCUUUUUCUAAAGGAACAAAUUAACAAAGAUGAUGCUAAACUUGAUGCAGGAAGUGUUAUCAUUCUCACAAAAGCACCAGAGAAAUGUGGGCACACAAUGCAUGUCUUCUCUGUUCAGGUGCUUCCGUGAAAACGAAAACACCCUCCGACAACAAGUUUAGCAUCAUGUUCCCAGCAUUGCACCUUUACAAAAGCUGCAUGGCAACUAUUUAUAUUCUUGCAAGCAUAUAGUUCAAUUGUAUGAGAAAUCAAUGGCCAUAGUCUAAUAUUGAAGAUAACAUUAAAUAAUUAAACUAGAAGAUACCCCGAGCAUUGCUACAAUAAUUCUUAGCUCAACGAAAAUUGAAAUGUAUGCUGCCAAAUGAAAUUUAUUUAUACAGUUAUUAUAUAAUGCAUACAGCCACACAUAGGAACAUGUAAAUCAAACAGAGGCAGCAAGAUAUAUAAUAAGAGUUCUAAGUUUUAUUUUUUUAUGUUAAAACCAUCUUCAGUGAGAACCAUGGCUUGAAGGUGAGGUUGUAAGAGCUUGAAACUCUGAUAGUUAUUGUUUGAUAACAUCUUCCUUCUGCAAUGUGCUUGUACAUGUAAUAACUACUUCUGAAUUCAGUCCAGAAGAAUCCUUGAGGUUUGCGAUUGCAUUUUACUGCAAAUCAUCA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
95.53%
ME_num:
MEP:
4.27%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.98
Avg Expression:
0.48
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_BLS256 | 4.05550998052758 | 0.000951451945656133 |
| 2 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Watered;Short_Day | 5.7091424326601 | 0.00140335857733303 |
| 3 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | -4.36065716440862 | 0.00272440753587844 |