Chr:
Chr9
Start:
10487602
End:
10488686
Strand:
+
Ref_name:
OSA-LNCN7656
Sequence
(OSA-LNCN7656.1):
GUGGGGAGGCAGCGGUGGGCUCGCUGGCGGGGAGGAGCCCUUCCCUCCGCCAGAUCUAGCGGGAGGGGAGGCAGCUGCAGGGGCAGCGGGCUCACCGGGGCUAGGUGGCGGCAGCUCGCGGAGGAGACGCGGUGGCGGCCGACAGUGGAUCCAGGCGUCGUCGCCAUCGUCGUCGCGGCCGUCAUUGUUGUCCCGGCCAGCGGUCGAUCUGCGCGCUCGAGGCUAGUUGGUGGUGGAUCCAGAUUUUGUCGUCUUUACGGUCGGCAGCAGAUCCAAGCACUGUCGCCGCCAUCGUCAUCACGGCCAGCGAUGGAUCUACGCGUCGUCACCGUGGCUGUCGUUGUCACCGCCUGAGGGAAAAGAGGAAGGCCGGAUGAGUUGAUUGCAAUUGCAGUCCAUCGAGCCACUGGAGC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
77.44%
ME_num:
MEP:
1.83%
HE_num:
HEP:
20.53%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
pistil
Tau :
0.96
Avg Expression:
213.14
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | BR-IRGA_409 // spikelet // control condition (29C) for 7 hrs--/--BR-IRGA_409 // spikelet // high temperature treatment (38C) for 7 hrs | 1.11992968054371 | 0.00492742167677577 |
| 2 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // Paclobutrazol (PB) | -1.12046910521512 | 0.0149320870073936 |
| 3 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // gibberellic acid (GA) | -6.65945529353425 | 3.34925112896476e-15 |