Chr:
Chr9
Start:
8174643
End:
8175190
Strand:
-
Ref_name:
OSA-LNCN7584
Sequence
(OSA-LNCN7584.1):
GGCUGGGGAAGCGGCCGCGGCGGCGACGGCGGUGUCCAGGGUGGGUUGGGGAAGCGGCGGCGGCGGCGUCCAGGGCGAGCGGGGAAGCGGCGGCGCCCUCCAGGUCGAACGGGGGCGGCGGCGGCGGCGCCCUCCAGGGCGGGCGGGGGAACCGGCGGCGGCGGGCGUGGCAGCGGGCGCCGCGAGGAGCGGGCGCUCGUGCGCGGGCCGGCCGCCUCGCCUCGCCGCCGCCGCCUCAUUCCCCGCUGCUCGCCUCCUCCUCCGCCGCCUCGCCUCGCCUCCGCCGCGCUCGCCUCCUCCGCCACACCUCGCCGCCGCUCGCCUCCUCCGCCGCCUCCUCUGCGCCUCAUCCCUCGCCGCCGCUGCCGCUCGCCGCCGCCGCCGCUCGCCGCCUCAUCCCUCGCCGCCGCUGCCGCUUGCCGCGCCCCGCCUGCCGCUGUCAUUCGUGAGAGAGUGAGAGAAGAGAGAGAGGAAGAGUAAGAGAAGAGAGAGGAAAAGUGUAUGACAG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
85.16%
ME_num:
MEP:
11.59%
HE_num:
HEP:
3.05%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
crown
Tau :
0.97
Avg Expression:
5.18
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Caidao // leaf // none (control)--/--Caidao // leaf // 0.5% Na2CO3 solution for 36h | -4.06251288149085 | 3.83660325592189e-06 |
| 2 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | 1.11541697509457 | 4.06866934540735e-08 |