Chr:
Chr9
Start:
739720
End:
745205
Strand:
-
Ref_name:
OSA-LNCN7451
Sequence
(OSA-LNCN7451.1):
GGGGCCCACAUGUCGGGGUUGUCUUCAACCUCCGGCCGGCCAACCGAGCCCGAGCGCCGCCGCCUCUCCUUCAAAUCCGCCUCCACCGGUUGCUUCCGAGUCCGAUUGAUUGAGGGGAAAUUAUCUCCUCCUUAUCCUCUUCCUUUCCCCUAAAGUUUCGGAGAUUAAUUUUGAUCGGAUAAACCGAAUCAAACUCGUUUUCUAGUUUAUCUCUCCAAACUAACCCUAGGAUUUUCCAGCUCAAAUCCUCUCAUUUGGAGUCCGAUCUCUCUAAUCCAAGCCUAUAUAAAGCAUCCCCUACUCGUCCUCUUCCGUUUGCCUCAAGUCCCAAGCCCCGCCGUUGCCCGUAGCGCUGCCGCCGCCGCCGCUGCUUCAGCCGCGCCGCGCCGUUGCUGUGGUCGUCGCCGCCGCCUUCCGUCGCCAUCGCCGGGUUUGUGAGGAGGAGGAGCACCCCGUCCGCUCCUCCGCAGCCGCCGAAGACCGCCGGAGCACCGUCGUCGACGUUGACCCGAGUUUCCGAUGUUCCGGAGGAGAGAGUUUACGUUGAGGAAGGUUCAGAAGCGUUUGAAGAAGCUCAAGGAUCAAAUCAACUGGCACGCUCACGAACCUAAAAGUAAGAUUUUGGACCUGCACAGGAAUUAAGCAGAUCUUCUAGGCCAGUAUGUGUUUUUUGCAUCAACACUCGUUUGAUGAACAAUCUGGUAGUGGUGGCAUUGGAAUUGUAAUGCGGGAUUGGUAUGGCAGAGUGAUGCUCGUUGUGGUAGCGCGCUAGAAUCAGAGCUUAUGGCAUGC
Sequence
(OSA-LNCN7451.2):
GGGGCCCACAUGUCGGGGUUGUCUUCAACCUCCGGCCGGCCAACCGAGCCCGAGCGCCGCCGCCUCUCCUUCAAAUCCGCCUCCACCGGUUGCUUCCGAGUCCGAUUGAUUGAGGGGAAAUUAUCUCCUCCUUAUCCUCUUCCUUUCCCCUAAAGUUUCGGAGAUUAAUUUUGAUCGGAUAAACCGAAUCAAACUCGUUUUCUAGUUUAUCUCUCCAAACUAACCCUAGGAUUUUCCAGCUCAAAUCCUCUCAUUUGGAGUCCGAUCUCUCUAAUCCAAGCCUAUAUAAAGCAUCCCCUACUCGUCCUCUUCCGUUUGCCUCAAGUCCCAAGCCCCGCCGUUGCCCGUAGCGCUGCCGCCGCCGCCGCUGCUUCAGCCGCGCCGCGCCGUUGCUGUGGUCGUCGCCGCCGCCUUCCGUCGCCAUCGCCGGGUUUGUGAGGAGGAGGAGCACCCCGUCCGCUCCUCCGCAGCCGCCGAAGACCGCCGGAGCACCGUCGUCGACGUUGACCCGAGUUUCCGAUGUUCCGGAGGAGAGAGUUUACGUUGAGGAAGGUUCAGAAGCGUUUGAAGAAGCUCAAGAGGAGGAGUAUUUCAGUGAAGGAGAUGAUCUGGAGGAUUAGGCUUUGUUCGGGUCAAGUUGCUUGUGGAGUGGAGUCGCCAUAGCUGUUUAGUCUUUUGUUUAUUUCCGCUGUGUAGAAUUUUAUUCUUUUGAGAGGAACCAUCCACCUCUAUAAUAAUUUAUUAUUUUGCGAAUAUUAAUUAGCUGUUUGAUAGUACUCUAUUAUCAAUUUGUUAUUGUGUGCCUCGGUUGAUUCCUGGACGAGGAUUUAACACACAUGUAAGCGUUUGGAAUUUUGGAUAGAAAUUCCGGGCGUGACAUUAUGCCUAUUGGGGUUAAUAAUAUGGAGAUAGUACUCAUUCCAAAGGUGGAUCAACCACUGGAACUACGUGAUUUCAUG
Sequence
(OSA-LNCN7451.3):
GGGGCCCACAUGUCGGGGUUGUCUUCAACCUCCGGCCGGCCAACCGAGCCCGAGCGCCGCCGCCUCUCCUUCAAAUCCGCCUCCACCGGUUGCUUCCGAGUCCGAUUGAUUGAGGGGAAAUUAUCUCCUCCUUAUCCUCUUCCUUUCCCCUAAAGUUUCGGAGAUUAAUUUUGAUCGGAUAAACCGAAUCAAACUCGUUUUCUAGUUUAUCUCUCCAAACUAACCCUAGGAUUUUCCAGCUCAAAUCCUCUCAUUUGGAGUCCGAUCUCUCUAAUCCAAGCCUAUAUAAAGCAUCCCCUACUCGUCCUCUUCCGUUUGCCUCAAGUCCCAAGCCCCGCCGUUGCCCGUAGCGCUGCCGCCGCCGCCGCUGCUUCAGCCGCGCCGCGCCGUUGCUGUGGUCGUCGCCGCCGCCUUCCGUCGCCAUCGCCGGGUUUGUGAGGAGGAGGAGCACCCCGUCCGCUCCUCCGCAGCCGCCGAAGACCGCCGGAGCACCGUCGUCGACGUUGACCCGAGGUGAGCCGCUGUCGGACCUCGUCGCCGGCCGUCGUUUGUCGUCGUCCGUCGUUGUUCUUUGCACCGUUUCCGAUGUUCCGGAGGAGAGAGUUUACGUUGAGGAAGGUUCAGAAGCGUUUGAAGAAGCUCAAGAGGAGGAGUAUUUCAGUGAAGGAGAUGAUCUGGAGGAUUAGGCUUUGUUCGGGUCAAGUUGCUUGUGGAGUGGAGUCGCCAUAGCUGUUUAGUCUUUUGUUUAUUUCCGCUGUGUAGAAUUUUAUUCUUUUGAGAGGAACCAUCCACCUCUAUAAUAAUUUAUUAUUUUGCGAAUAUUAAUUAGCUGUUUGAUAGUACUCUAUUAUCAAUUUGUUAUUGUGUGCCUCGGUUGAUUCCUGGACGAGGAUUUAACACACAUGUAAGCGUUUGGAAUUUUGGAUAGAAAUUCCGGGCGUGACAUUAUGCCUAUUGGGGUUAAUAAUAUGGAGAUAGUACUCAUUCCAAAGGUGGAUCAACCACUGG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
42.68%
ME_num:
MEP:
57.11%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.71
Avg Expression:
2.74
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Caidao // leaf // none (control)--/--Caidao // leaf // 0.5% Na2CO3 solution for 36h | -5.47268159174754 | 0.00864706691245876 |
| 2 | WD20342 // leaf // none (control)--/--WD20342 // leaf // 0.5% Na2CO3 solution for 36h | -5.67633368042742 | 0.00221021503924347 |
| 3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | -2.64287358527544 | 0.0172759817785861 |
| 4 | Nipponbare // panicle // AM--/--Nipponbare // panicle // PM | -2.34057834217597 | 4.32835322499321e-05 |
| 5 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | 1.12264697313408 | 0.0187850009523419 |