Chr:
Chr9
Start:
143597
End:
146101
Strand:
-
Ref_name:
OSA-LNCN7437
Sequence
(OSA-LNCN7437.1):
CUUAUAUAUUGAGGUUGUGGAGAGUAAAAAUCGAUCAUUGGGUUGGAGGAGAUCGAUGCAACAGUGAGACAAGGAUGAUGCCAACAAAUGUGCACAUCUCUGCUGCACUAAUGGUGUCGCUAGUGCUGGCAGCUACGGUUGUUGCACAUGUAGAAGUCGGUGAAGUUGGUGAGUACUUGGAAAAACGUUCACAGGAGGCCCGCCACAAGAACCAUGUUGGACCCCUCCACGAUCUCGUUAACACGGCAACUCGUUUCCACGAAGGCCUACUUCAGAGGGCUAACAGCCGGAGGUCUAUGUUGGGUGAUGAAGCACAUAUGCAAAAGAGGUCUUGAAGCCUCAAGUGUGGAAAGUGGUGAUGAUCAUCAAGUAGUACAAGAUCAUAAUGGCAUCCAACUUUAAUUUACCAUAUAUUUAGCUUUAUUUUAUCAUUGAUCUGCUGCUCCAAGCAGCACACGUGGUGGCACAUGAUUUUUAAAGAAUACGAAAUACACAUAAAUUCCAUAUACAAGACAUCGCAUCUAGUGAAAGAUAGCGACAUAUCUAGUUGAACUGUACUUCAUUAAUUAACCAUACUACUAUGUAUACACAAUGGAACAUGCCUUGAUUCAUGAUGGUACAAACAAUGGCUUGUGAGUACUAUAGUUGCUACUGUAAUUUUUAUUUAUUUCAGAAACAUUUUACCAUAUAAUACAUAAGGAAAUAUAUUUGAUGACACAAAUUAAACAAUGAGUGGCAUGAGGACAGCACAUGAGAUGUGGGAAUAGUGCAUGAGAGAUGGCUACAAGAAAUAUGUAACAUCCAAUUUUUUUGUCACUAUUUUAGGAUGACAUCUGUGUGGUUGUAGUAAAAAAGUUGAAAUAUUUAAACACUUCUAGCGAGGCACUUGAUCCACUAUACAUAUCUCAGCUUCCUUGAUGAGGCCCUUUCGUCAAGA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
76.22%
ME_num:
MEP:
13.62%
HE_num:
HEP:
9.96%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.99
Avg Expression:
1143.82
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 3hA | 2.38215566603364 | 0.0476762355621199 |
| 2 | BR-IRGA_409 // spikelet // control condition (29C) for 7 hrs--/--BR-IRGA_409 // spikelet // high temperature treatment (38C) for 7 hrs | 1.8857965850057 | 5.7021727447957e-11 |