Chr:
Chr8
Start:
27104446
End:
27112823
Strand:
+
Ref_name:
OSA-LNCN7397
Sequence
(OSA-LNCN7397.1):
CGGCUGCGGGUUCUGCUCCUCCGCCGUCGAGCUCACCUCCGCGUACGAGCUGCAUCCAGAUCAACACAACAGUGAAAGGAUGUCGGCGCCAACGUGGGAUGUGAAUGUGAUGCUGCUGCUGCUUCUGCAAUAAUCACUGGAUGACAGGCAAGCAUCACACUGCAUGCAGACAACCGUAACGAAAUAAACAGGAGUAGGAGUAUAAUUUUACAGAUCAGAUAAAUUUGUUGUUUUGAAAUAUUAAUCAUGUACUAGAUCUGUCCCAUUGAUCCAUCAUGCACAUUAAUUCAGGAUUUAAUGUGCCAUUUGGAACACCGGAAUGUUUUUAGAAAUAUUUAUGACUUGUCAUGGUAGGUAGGUACUGUGAAAUUACUGUGUUCCAUGGACUGUUGAUAGGAUUAUUCCAUUAUCUAAUAAGGAGAAAAUGGCAGUUGAUGAGGAACACUUGAGUAGGCAGUGGAUAUGGAUGGUGGUAUUGCUACAUGUCACAUGCGUGGGGGCAUGGAAUUCUGACUUUCUGAACAGAGCAUUAUCUACUCCCAUCUUGCAUGCAUCAAUUCCCCCCAAAUCCAAUCUUUUUCCUACCUGUAAGUGCUGCAUUGAUCAUUCUGUUGUCUGAAUCUCUGUUACUCCAAAGAAACAACAGAUCUACUCAGAGUUUCAGAUAAAUUAUGUGCUUUUUAGAGUGCGACAUGAUGUACUGUUACUGAACAGUGAUCGUUGCUUGAAUGGCACUAGGAAGUAAUCCUAUAUGGGAAAUCAAAAUAAGGGCAUAUUUAGUU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
85.37%
ME_num:
MEP:
14.43%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
embryo
Tau :
0.89
Avg Expression:
1.14
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | -2.18629716543977 | 0.0318595875200294 |
2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dA | -3.90532866027064 | 0.00399352820833124 |
3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | -2.39561238911527 | 0.0104408109286819 |