Chr:
Chr8
Start:
27083441
End:
27086357
Strand:
-
Ref_name:
OSA-LNCN7396
Sequence
(OSA-LNCN7396.1):
UAAUUGGAUAAAUGGAAGUGCUGAGAUGAAGACUUGACCAGUUGACCUGAUGACCUCUGGUCUUCGCUGCUAGUCUAGUCUUUCUGCAUUUUUAGUCAUCUGAAAAACUUGCUUUCCUGUGUAUUAAUUGCAUUUUGCAGUAACUGGCCUUUUUGGCUUGACGGCCAGGGAGGAACUGCAAUUACCGAUCGAGAAAAGGGUGUACACAAGGGAUAUGUUUGCUGAGAUUAAAGCAGUACCACCUGUACACUCUGGGAGAGAUGGCACAUCAGGAUACACCUCAG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
45.12%
ME_num:
MEP:
53.86%
HE_num:
HEP:
0.81%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
flower
Tau :
0.57
Avg Expression:
2.04
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // panicle // AM--/--Nipponbare // panicle // PM | 2.31703874622128 | 0.0327595695021246 |