Chr:
Chr8
Start:
21089012
End:
21093662
Strand:
-
Ref_name:
OSA-LNCN7285
Sequence
(OSA-LNCN7285.1):
CUCCAGUGAGACAGUGACCGAUUAACACGGUUUUUUGACCCAUAAUUUGAAGCGACAGCGAAUUUGACACUCGAUUUCCGAUUGGAAUAUCAUCAGGAACUCAUCUGCGUAGUGCGUCCCCCUCAUUUUCAGCAUCUCCACCGAGUGUUAGCAAAGAAUGAUUGGAUCAAAUCUGACCAAGACUGACGAGAAGAAUGAUCCGUGUUGAAUUUUGUUCCGAACUUGAUAUGUGCAGGAGAGCAGCUUCAUUU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
1.63%
ME_num:
MEP:
46.54%
HE_num:
HEP:
51.63%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot_apical_meristem
Tau :
0.68
Avg Expression:
14.65
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN | 1.83893709368379 | 0.0226210269802799 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | 1.71119562132481 | 0.0206518832780481 |
| 3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | 1.56521088631759 | 0.0433814560037495 |