Chr:
Chr8
Start:
21087218
End:
21090681
Strand:
+
Ref_name:
OSA-LNCN7284
Sequence
(OSA-LNCN7284.1):
CCCAUAUUAAUCUGUUGCUUGAUGCACGCACACCUUGGCAUUACCGGUUUACUCAGGGCUUGCCGGGCCAGCAUCAGAUCCUCCGCUGCCGCCGCCGCCGGCGAGAGGGGCGGACCGCAGGACCACCGUGCGGCGCGGCGUGCUUCACGGCGGCCGGCCGACAAAAGCAGGAGGCAUCAGCUGCAGGGGGACGGUAAUGGGAAUCGAUGGCGAUCGAUCGAUUUUGAUUGAUUUUGUGUCAUUCUGUGGAGGGACGCUAACGACGACGACUGACAGCGACUCGAUCACGUACGCAGAAUUUCUAUAUAUCUACACACUAGCUCAUCACUACCCGUUGUCGUGUGAAGCUACAGUGUUCAUUCACUCUCUCUAAUUAUUUUUUCUUGUCCAGUUCGAUCUACGGAUGGAUCGGUCUCAGAGACAAUAUUCUGAACCCCUCUGAUGAAUCGGCACAUGCAAAUGCACUCCUCUGCUUACUGGUAAUGGGCCCCACCACCCGGGGUGGGCCUGUGCCACCCUGGCAACACAAACUGGCCCCCACCUUGUCAGAAAACACUUUGCUGACUCAUCCGCACGCCGUGCCACUAUACCACCAUACUCCCGCCAUCUCAUCAUCUCACCCCUCGUAGCCAUCAUCGCGACGAGCAACGUGUGACCCACCUGUCAGUCACCGCGCCGAUGUGUCGCCUACGUGGCAGGGAUGGUGGUGAUGCGGUGAAUUUAACAUUUUGACCGCUCCGUCGUUGUUGUCGCGGACGGAUGAAACGGCCAGGUCAGCAGCCGGCGAGCGCCAGCGUGGCACACGGGGAGACGAGAAGCGACAAUGGGUAAAAACGUGCAAACAGCAAGCUCAGCGACAACGAGUUGCCGGCGGCCACAGAAGUUAAAAACUAUAAUAAGAACAGAAAUGGAAGCUAAAAAAUGGCCUAGAGUUUGGAAAAAAUUGCAGCUGAAAAGAGACGGAAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
78.25%
ME_num:
MEP:
21.54%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
embryo
Tau :
0.74
Avg Expression:
1.08
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN | 2.17627041602521 | 0.00840074059055676 |
2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | 2.14682151159247 | 0.00556705919617093 |
3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | 1.65586686301806 | 0.0455286021822077 |
4 | Nipponbare // shoot // "Control,22C for 10 min"--/--Nipponbare // shoot // "Heat,42C for 10 min" | 5.61497751546832 | 0.0402095469280049 |