Chr:
Chr8
Start:
20641994
End:
20643969
Strand:
+
Ref_name:
OSA-LNCN7275
Sequence
(OSA-LNCN7275.1):
CCAGCCCAUUAGUUCUCCCCUAAAACCUAGAGAGAGGGGAACCGAAUCCCACUUCCCCUCAUAGUGCCGCCACCCCUCUCCCUGGCCGGCACCUCCUUCCUUCCCUUCUGCUGUGUUCGCAUCUCUCCCUUCUACAGCAAAUUGCUCUCUCUAUAUCUCCGCCUUCAUAGCUUGGAUCAAGAAGCAAAGUAGAAAAACGAAACGAGGAGGAGGAGAGAAGUAAAAGGAGGGGUUAGAUCGGAGUCUCCCCUAUUGUCUCCUUACAAGUUCUCUAAAGAAACCCUAGGUACGUAUUGAGACCGACAUGCAUGGGCGGGAAGUAGCACCUUUAUAUACACAUUUAUCUGCACACUAUCAAACUAUAUUGCCUAGGUCCAUAAUGAUACUUAAACUAUAUCAUGAUUCGGUCUUGUAAUAAUCUUUUAGAUUUCUAAUAGUUUCUUCCCCAUGGAUUAUAAGGAUGGAUCGCACUGUAGGAAUGAUAUUAUUAUUAGUUCAAUUUAUAACUGUUUGUCGUGAAUGUCCAUAUUUACAGGGGAGACUCUGCCGAAAUUUCUA
Sequence
(OSA-LNCN7275.2):
CCGAAUCCCACUUCCCCUCAUAGUGCCGCCACCCCUCUCCCUGGCCGGCACCUCCUUCCUUCCCUUCUGCUGUGUUCGCAUCUCUCCCUUCUACAGCAAAUUGCUCUCUCUAUAUCUCCGCCUUCAUAGCUUGGAUCAAGAAGCAAAGUAGAAAAACGAAACGAGGAGGAGGAGAGAAGUAAAAGGAGGGGUUAGAUCGGAGUCUCCCCUAUUGUCUCCUUACAAGUUCUCUAAAGAAACCCUAGGUGGUGGUCCAUCAGAUCGUGCAUGAUACCAAUCCUUCGUUGGAGGUACGUAUUGAGACCGACAUGCAUGGGCGGGAAGUAGCACCUUUAUAUACACAUUUAUCUGCACACUAUCAAACUAUAUUGCCUAGGUCCAUAAUGAUACUUAAACUAUAUCAUGAUUCGGUCUUGUAAUAAUCUUUUAGAUUUCUAAUAGUUUCUUCCCCAUGGAUUAUAAGGAUGGAUCGCACUGUAGGAAUGAUAUUAUUAUUAGUUCAAUUUAUAACUGUUUGUCGUGAAUGUCCAUAUUUACAGGGGAGACUCUGCCGAAAUUUCUA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
92.28%
ME_num:
MEP:
7.52%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
crown
Tau :
0.96
Avg Expression:
1.75
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA | 3.58374374852345 | 0.0170700484481054 |
2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dA | 3.1080989250373 | 0.0290060184326162 |