Chr:
Chr8
Start:
20387908
End:
20399906
Strand:
-
Ref_name:
OSA-LNCN7270
Sequence
(OSA-LNCN7270.1):
UCGCACGCCGCCGCUCCGCCUCGCUGUUGCCCCACUCCACUUGCCGUAGUGCUCGAGCUCGUUGUCUUUGAUCUCCCCCGUGCUCCCGCUGCCACCUCCCUCCUCUUCUCCCGUGUCGCCGCCGCCGCGUCACCACUGCCGCAUCGCCGGCGGCUGGCCUGCCCAGGGAGAUGAGUGUGUGAGAGAGAGAGAGGAGGAAGGGAGAGUAGGGGAAAGAGAGACCCUGAUGACGUGGCGUCCUGACAUGUGGGGCCCACAUGGGUCCCAUGCUGACUCACACGCCAUGUCGGAUAAAGUAAAGAGAACAGUUUUGUAGGUUAAGGGAUGUCAUAUAUCUGGUUUUGUGGUUAGGGGACGAUUUUGUAAUUCGAUGACAAGUUGAGGGACCUUCGGUGUACUUUUCCAUCCUAAAUAGAUUAUGGGCUCGGGUCUCAUCCUUUCCGCCAUUUUAAGGCCCAUUCCAAUCCGAAGAAGGCGAGGCAAUAAAACGGGCUUGCGGAGGCGGCCCAACAAACAAGAGUUGGAACUCCAAAUCCCCUUCUCUUCCGACGCCGGCGCCGGCUAGUCGCCGCCGGCCACUCCGGCCGGCUCACCGUCACCGGCCUCUCCUCCCCGCCCAAAACCCCACACCCCAUCUCACGCCCAGAGAUCGCCGCCGCGCAGCCUCGGCGGCGGAGACGGACGCGGGCACUGAGCACAUCGAUUGCAAGUGGUAAGCCAGCACAUAGAUUGGAGAUUCGUUCACGGUGUUGGCAGAUCUCCUCACCAGGGGAAAAGCUCGAAGAUCCAAAAGCUUUGUAGCAGAAGAGAUUCCAAUCAUCUGGGGAAGUCAACUGUGUUAUCGUAAUGGUAUACACAGAGGUUGCUGACUUAAGAAAUACUCAGAAGCAGCAUAAUUUUCAGUAUGAAUAUGGAGUUCGAGCUAGCAACUUCUUCUGCAUAGUAGAUUAUGCUAAUAAGCAAGAUGUUUUGCCACAAACAACAGAACUUCAGACCAGAUCAUUAUUUCAAAGUUUCCCAUGUUUAUCCAACGAAUAUGAUUUUUAUGAGAAAAACUUUGUGUGAUCUUGACUGAAAAGAGCAACUGGUGCUGAUAUGAAGAAUGAAGGAGAGAUACACUAUUAGUUAAUCAAGUUCUAUUGUGAUCUCUACAAAGAAGUAUGGUCUUCCAGACAAAUAAGUUCCUGUGUCAUCCAUGAUGUUUCCAGAGAGCAAUUGUAAAUUAUCAUCCACAAAGCAUGGUGGUAGUUGCCAUUUGGAACUGCUGUCAGAAUUACCAAGUCAAUAACCCAUGCUUGAUUAUUACAAGAAGUGAUACCAGUGAAAGAUCAAGUACACAAAUGCAGCAGGUAAAUCAGUGGUCAUAGGAUCAUAUCGAGCCAGGAAUAAGAACAUUUCAAGAAAGAAUGCUAAAUAUGGUUAUGAGAAGGAAAAGAGAGUGAUCCAUGGAACAUAGCUUGGUAGGCUGAAUCCAAAGAAUAGGAGACAUUAGAUGUUCAUUUUUAAAAGAAAGGAGCUUGAAGCUGAAAUGUUCAUACUUAUUGCCAGAUUCCCAUAUAUCCCAUGACGACUGCAGUAGGCAAGCC
Sequence
(OSA-LNCN7270.2):
UCGCACGCCGCCGCUCCGCCUCGCUGUUGCCCCACUCCACUUGCCGUAGUGCUCGAGCUCGUUGUCUUUGAUCUCCCCCGUGCUCCCGCUGCCACCUCCCUCCUCUUCUCCCGUGUCGCCGCCGCCGCGUCACCACUGCCGCAUCGCCGGCGGCUGGCCUGCCCAGGGAGAUGAGUGUGUGAGAGAGAGAGAGGAGGAAGGGAGAGUAGGGGAAAGAGAGACCCUGAUGACGUGGCGUCCUGACAUGUGGGGCCCACAUGGGUCCCAUGCUGACUCACACGCCAUGUCGGAUAAAGUAAAGAGAACAGUUUUGUAGGUUAAGGGAUGUCAUAUAUCUGGUUUUGUGGUUAGGGGACGAUUUUGUAAUUCGAUGACAAGUUGAGGGACCUUCGGUGUACUUUUCCAUCCUAAAUAGAUUAUGGGCUCGGGUCUCAUCCUUUCCGCCAUUUUAAGGCCCAUUCCAAUCCGAAGAAGGCGAGGCAAUAAAACGGGCUUGCGGAGGCGGCCCAACAAACAAGAGUUGGAACUCCAAAUCCCCUUCUCUUCCGACGCCGGCGCCGGCUAGUCGCCGCCGGCCACUCCGGCCGGCUCACCGUCACCGGCCUCUCCUCCCCGCCCAAAACCCCACACCCCAUCUCACGCCCAGAGAUCGCCGCCGCGCAGCCUCGGCGGCGGAGACGGACGCGAUUAGGUAUACACAGAGGUUGCUGACUUAAGAAAUACUCAGAAGCAGCAUAAUUUUCAGUAUGAAUAUGGAGUUCGAGCUAGCAACUUCUUCUGCAUAGUAGAUUAUGCUAAUAAGCAAGAUGUUUUGCCACAAACAACAGAACUUCAGACCAGAUCAUUAUUUCAAAGUUUCCCAUGUUUAUCCAACGAAUAUGAUUUUUAUGAGAAAAACUUUGUGUGAUCUUGACUGAAAAGAGCAACUGGUGCUGAUAUGAAGAAUGAAGGAGAGAUACACUAUUAGUUAAUCAAGUUCUAUUGUGAUCUCUACAAAGAAGUAUGGUCUUCCAGACAAAUAAGUUCCUGUGUCAUCCAUGAUGUUUCCAGAGAGCAAUUCUCUGUUCUUUUCAAAAUAGCCAUGCAUCUCUGCAGAUGCAUGUGGAGAAACACUGAUCCAGCAUGUACACCAAUUUGCCAGAUGUGUAUGCGUAUCAAUCAAGAGAAUGCACCAAGCCAUAAU
Sequence
(OSA-LNCN7270.3):
UCGCACGCCGCCGCUCCGCCUCGCUGUUGCCCCACUCCACUUGCCGUAGUGCUCGAGCUCGUUGUCUUUGAUCUCCCCCGUGCUCCCGCUGCCACCUCCCUCCUCUUCUCCCGUGUCGCCGCCGCCGCGUCACCACUGCCGCAUCGCCGGCGGCUGGCCUGCCCAGGGAGAUGAGUGUGUGAGAGAGAGAGAGGAGGAAGGGAGAGUAGGGGAAAGAGAGACCCUGAUGACGUGGCGUCCUGACAUGUGGGGCCCACAUGGGUCCCAUGCUGACUCACACGCCAUGUCGGAUAAAGUAAAGAGAACAGUUUUGUAGGUUAAGGGAUGUCAUAUAUCUGGUUUUGUGGUUAGGGGACGAUUUUGUAAUUCGAUGACAAGUUGAGGGACCUUCGGUGUACUUUUCCAUCCUAAAUAGAUUAUGGGCUCGGGUCUCAUCCUUUCCGCCAUUUUAAGGCCCAUUCCAAUCCGAAGAAGGCGAGGCAAUAAAACGGGCUUGCGGAGGCGGCCCAACAAACAAGAGUUGGAACUCCAAAUCCCCUUCUCUUCCGACGCCGGCGCCGGCUAGUCGCCGCCGGCCACUCCGGCCGGCUCACCGUCACCGGCCUCUCCUCCCCGCCCAAAACCCCACACCCCAUCUCACGCCCAGAGAUCGCCGCCGCGCAGCCUCGGCGGCGGAGACGGACGCGAAGGGCACUGAGCACAUCGAUUGCAAGUGGUAAGCCAGCACAUAGAUUGGAGAUUCGUUCACGGUGUUGGCAGAUCUCCUCACCAGGGGAAAAGCUCGAAGAUCCAAAAGCUUUGUAGCAGAAGAGAUUCCAAUCAUCUGGGGAAGUCAACUGUGUUAUCGUAAUGAUUAGGUAUACACAGAGGUUGCUGACUUAAGAAAUACUCAGAAGCAGCAUAAUUUUCAGUAUGAAUAUGGAGUUCGAGCUAGCAACUUCUUCUGCAUAGUAGAUUAUGCUAAUAAGCAAGAUGUUUUGCCACAAACAACAGAACUUCAGACCAGAUCAUUAUUUCAAAGUUUCCCAUGUUUAUCCAACGAAUAUGAUUUUUAUGAGAAAAACUUUGUGUGAUCUUGACUGAAAAGAGCAACUGGUGCUGAUAUGAAGAAUGAAGGAGAGAUACACUAUUAGUUAAUCAAGUUCUAUUGUGAUCUCUACAAAGAAGUAUGGUCUUCCAGACAAAUAAGUUCCUGUGUCAUCCAUGAUGUUUCCAGAGAGCAAUUCUCUGUUCUUUUCAAAAUAGCCAUGCAUCUCUGCAGAUGCAUGUGGAGAAACACUGAUCCAGCAUGUACACCAAUUUGCCAGAUGUGUAUGCGUAUCAAUCAAGAGAAUGCACCAAGCCA
Sequence
(OSA-LNCN7270.4):
UCGCACGCCGCCGCUCCGCCUCGCUGUUGCCCCACUCCACUUGCCGUAGUGCUCGAGCUCGUUGUCUUUGAUCUCCCCCGUGCUCCCGCUGCCACCUCCCUCCUCUUCUCCCGUGUCGCCGCCGCCGCGUCACCACUGCCGCAUCGCCGGCGGCUGGCCUGCCCAGGGAGAUGAGUGUGUGAGAGAGAGAGAGGAGGAAGGGAGAGUAGGGGAAAGAGAGACCCUGAUGACGUGGCGUCCUGACAUGUGGGGCCCACAUGGGUCCCAUGCUGACUCACACGCCAUGUCGGAUAAAGUAAAGAGAACAGUUUUGUAGGUUAAGGGAUGUCAUAUAUCUGGUUUUGUGGUUAGGGGACGAUUUUGUAAUUCGAUGACAAGUUGAGGGACCUUCGGUGUACUUUUCCAUCCUAAAUAGAUUAUGGGCUCGGGUCUCAUCCUUUCCGCCAUUUUAAGGCCCAUUCCAAUCCGAAGAAGGCGAGGCAAUAAAACGGGCUUGCGGAGGCGGCCCAACAAACAAGAGUUGGAACUCCAAAUCCCCUUCUCUUCCGACGCCGGCGCCGGCUAGUCGCCGCCGGCCACUCCGGCCGGCUCACCGUCACCGGCCUCUCCUCCCCGCCCAAAACCCCACACCCCAUCUCACGCCCAGAGAUCGCCGCCGCGCAGCCUCGGCGGCGGAGACGGACGCGGGCACUGAGCACAUCGAUUGCAAGUGGUAAGCCAGCACAUAGAUUGGAGAUUCGUUCACGGUGUUGGCAGAUCUCCUCACCAGGGGAAAAGCUCGAAGAUCCAAAAGCUUUGUAGCAGAAGAGAUUCCAAUCAUCUGGGGAAGUCAACUGUGUUAUCGUAAUGAUUAGGUAUACACAGAGGUUGCUGACUUAAGAAAUACUCAGAAGCAGCAUAAUUUUCAGUAUGAAUAUGGAGUUCGAGCUAGCAACUUCUUCUGCAUAGUAGAUUAUGCUAAUAAGCAAGAUGUUUUGCCACAAACAACAGAACUUCAGACCAGAUCAUUAUUUCAAAGUUUCCCAUGUUUAUCCAACGAAUAUGAUUUUUAUGAGAAAAACUUUGUGUGAUCUUGACUGAAAAGAGCAACUGGUGCUGAUAUGAAGAAUGAAGGAGAGGUAGUCAACAGUUCCAGCAAAGCUGUUGCUUUGUUAGAGUUUGGUGCAUUUGAUGAUCAGUUCAAGCAGAUACAGUUGCUCCCUUGAUACACUAUUAGUUAAUCAAGUUCUAUUGUGAUCUCUACAAAGAAGUAUGGUCUUCCAGACAAAUAAGUUCCUGUGUCAUCCAUGAUGUUUCCAGAGAGCAAUUCUCUGUUCUUUUCAAAAUAGCCAUGCAUCUCUGCAGAUGCAUGUGGAGAAACACUGAUCCAGCAUGUACACCAAUUUGCCAGAUGUGUAUGCGUAUCAAUCAAGAGAAUG
Sequence
(OSA-LNCN7270.5):
AAGCCUGCAGUUAUGAGGAAAUUGCAACUUUCAAGUAGGCUACUGCAUGUAGCAGAACAAGAUAUAUCUUCUAAGGGAGUGGUCAAUAUGCCCAAAAGAGGUGGAUGCAUAAUUAAGGUUGAAUGAGUGAUGGGUGGUUUAGUGCUUAAAUUAAAAGAUUAGGUAUACACAGAGGUUGCUGACUUAAGAAAUACUCAGAAGCAGCAUAAUUUUCAGUAUGAAUAUGGAGUUCGAGCUAGCAACUUCUUCUGCAUAGUAGAUUAUGCUAAUAAGCAAGAUGUUUUGCCACAAACAACAGAACUUCAGACCAGAUCAUUAUUUCAAAGUUUCCCAUGUUUAUCCAACGAAUAUGAUUUUUAUGAGAAAAACUUUGUGUGAUCUUGACUGAAAAGAGCAACUGGUGCUGAUAUGAAGAAUGAAGGAGAGGUAGUCAACAGUUCCAGCAAAGCUGUUGCUUUGUUAGAGUUUGGUGCAUUUGAUGAUCAGUUCAAGCAGAUACAGUUGCUCCCUUGUGACAAAUCUAGCCUAUUUAGAACAGUUCUUAACCCAGUCUAGAUUAUUUUAAAACCAUUGAUGGUCAAACUUUAGGAUGCUACAUAUUCUGGAAUGCCAAAUAAGAAAUAAUGGAGGGAGUAUUGGAAGCAAUCAUAAACAUGAUCAUGAAGAUACACUAUUAGUUAAUCAAGUUCUAUUGUGAUCUCUACAAAGAAGUAUGGUCUUCCAGACAAAUAAGUUCCUGUGUCAUCCAUGAUGUUUCCAGAGAGCAAUUCUCUGUUCUUUUCAAAAUAGCCAUGCAUCUCUGCAGAUGCAUGUGGAGAAACACUGAUCCAGCAUGUACACCAAUUUGCCAGAU
Sequence
(OSA-LNCN7270.6):
UCGCACGCCGCCGCUCCGCCUCGCUGUUGCCCCACUCCACUUGCCGUAGUGCUCGAGCUCGUUGUCUUUGAUCUCCCCCGUGCUCCCGCUGCCACCUCCCUCCUCUUCUCCCGUGUCGCCGCCGCCGCGUCACCACUGCCGCAUCGCCGGCGGCUGGCCUGCCCAGGGAGAUGAGUGUGUGAGAGAGAGAGAGGAGGAAGGGAGAGUAGGGGAAAGAGAGACCCUGAUGACGUGGCGUCCUGACAUGUGGGGCCCACAUGGGUCCCAUGCUGACUCACACGCCAUGUCGGAUAAAGUAAAGAGAACAGUUUUGUAGGUUAAGGGAUGUCAUAUAUCUGGUUUUGUGGUUAGGGGACGAUUUUGUAAUUCGAUGACAAGUUGAGGGACCUUCGGUGUACUUUUCCAUCCUAAAUAGAUUAUGGGCUCGGGUCUCAUCCUUUCCGCCAUUUUAAGGCCCAUUCCAAUCCGAAGAAGGCGAGGCAAUAAAACGGGCUUGCGGAGGCGGCCCAACAAACAAGAGUUGGAACUCCAAAUCCCCUUCUCUUCCGACGCCGGCGCCGGCUAGUCGCCGCCGGCCACUCCGGCCGGCUCACCGUCACCGGCCUCUCCUCCCCGCCCAAAACCCCACACCCCAUCUCACGCCCAGAGAUCGCCGCCGCGCAGCCUCGGCGGCGGAGACGGACGCGAAGGGCACUGAGCACAUCGAUUGCAAGUGGUAAGCCAGCACAUAGAUUGGAGAUUCGUUCACGGUGUUGGCAGAUCUCCUCACCAGGGGAAAAGCUCGAAGAUCCAAAAGCUUUGUAGCAGAAGAGAUUCCAAUCAUCUGGGGAAGUCAACUGUGUUAUCGUAAUGAAACCGCUGUAUCAUGCCACUGAGCUCAUCUUCAUCCAUUAUAUUGAUUGCAUCGGGCCUCACAACAGUUUCUGCUGCACCUCUUCCCAGUGUAAGACCUAUCUCCAUGAUGGACAAAUUCUUGCAAAGUUGCAAGCCUGCAGUUAUGAGGAAAUUGCAACUUUCAAGUAGGCUACUGCAUGUAGCAGAACAAGAUAUAUCUUCUAAGGGAGUGGUCAAUAUGCCCAAAAGAGGUGGAUGCAUAAUUAAGGUUGAAUGAGUGAUGGGUGGUUUAGUGCUUAAAUUAAAAGAUUAGGUAUACACAGAGGUUGCUGACUUAAGAAAUACUCAGAAGCAGCAUAAUUUUCAGUAUGAAUAUGGAGUUCGAGCUAGCAACUUCUUCUGCAUAGUAGAUUAUGCUAAUAAGCAAGAUGUUUUGCCACAAACAACAGAACUUCAGACCAGAUCAUUAUUUCAAAGUUUCCCAUGUUUAUCCAACGAAUAUGAUUUUUAUGAGAAAAACUUUGUGUGAUCUUGACUGAAAAGAGCAACUGGUGCUGAUAUGAAGAAUGAAGGAGAGGUAGUCAACAGUUCCAGCAAAGCUGUUGCUUUGUUAGAGUUUGGUGCAUUUGAUGAUCAGUUCAAGCAGAUACAGUUGCUCCCUUGAUACACUAUUAGUUAAUCAAGUUCUAUUGUGAUCUCUACAAAGAAGUAUGGUCUUCCAGACAAAUAAGUUCCUGUGUCAUCCAUGAUGUUUCCAGAGAGCAAUUGUAACUCUGUUCUUUUCAAAAUAGCCAUGCAUCUCUGCAGAUGCAUGUGGAGA
Sequence
(OSA-LNCN7270.7):
GCUGCACCUCUUCCCAGUGUAAGACCUAUCUCCAUGAUGGACAAAUUCUUGCAAAGUUGCAAGCCUGCAGUUAUGAGGAAAUUGCAACUUUCAAGUAGGCUACUGCAUGUAGCAGAACAAGAUAUAUCUUCUAAGGGAGUGGUCAAUAUGCCCAAAAGAGAUUAGGUAUACACAGAGGUUGCUGACUUAAGAAAUACUCAGAAGCAGCAUAAUUUUCAGUAUGAAUAUGGAGUUCGAGCUAGCAACUUCUUCUGCAUAGUAGAUUAUGCUAAUAAGCAAGAUGUUUUGCCACAAACAACAGAACUUCAGACCAGAUCAUUAUUUCAAAGUUUCCCAUGUUUAUCCAACGAAUAUGAUUUUUAUGAGAAAAACUUUGUGUGAUCUUGACUGAAAAGAGCAACUGGUGCUGAUAUGAAGAAUGAAGGAGAG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
2.24%
ME_num:
MEP:
60.77%
HE_num:
HEP:
36.79%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
embryo
Tau :
0.43
Avg Expression:
6.69
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA | -1.03797209492504 | 0.0013267968850419 |