Chr:
Chr8
Start:
16698707
End:
16704601
Strand:
+
Ref_name:
OSA-LNCN7150
Sequence
(OSA-LNCN7150.1):
UUUUUUAUUUUUAUUUCAUUUUUUUGAUAUUUUUUUCACACUUAGGAGAACAUAGGAACCAACCGUAUAAAAAAUAAACUCAAACGGACAAAAUAUGUGACAUGUAGAAUUUUCCAAAACUCUACCGAAACGGACAAAAUAUGUCAUCUAUUAAAAUAGGCGUAACUUUCUCAUACGGACUCGGAAUCAGGCAAAUAAUAUAUGCACGGACAUCUCUGGCGCCCUAAAAAGGACCAUUUUUGGGAUAAGUUUUUCUAGGGAUCUACUUGCGAAAUAAGUUUUUCAAAAGGACCAAAAUGUGAAAAAUCCAGAUGCAGUGGGUGAACAAAUUCACUUUGACAACUCUUGUAGCCUGAGCGAGCAUGCUUAUUGAUUUAUACUGCACUAGAAAACUCAUCAAUUUCGUGACAAAUAUUUGUGUUGAGUGCGGGGCAUUCAUCUUUCUAUGCUUUACUACCAUGUGCACUCUGAAAAAAAGUCAGGUAAGUUUCUCCCGGUUGCCAGGGGCAAUUGAAGAACUAGCAGUAAAUCACUGACCUUUACCAUGUAAACCAACGGUUGCAAAGGAAUUAUUGUUGUUGUGUGUGUGUGUCAGUGUGUGUAGGAAGCCUACAUAAAAUGCUUACAUACGUCCGGGAGUACAUACACCUUGCUCUCAUCCACCGUUCAUCCCAGCUAGCAC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
97.56%
ME_num:
MEP:
1.63%
HE_num:
HEP:
0.61%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
spikelet
Tau :
0.96
Avg Expression:
0.87
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Caidao // leaf // none (control)--/--Caidao // leaf // 0.5% Na2CO3 solution for 36h | 8.2875482328356 | 3.46118237968361e-06 |
| 2 | WD20342 // leaf // none (control)--/--WD20342 // leaf // 0.5% Na2CO3 solution for 36h | 6.83692267251236 | 1.9065208777149e-05 |