Chr:
Chr8
Start:
13853375
End:
13856141
Strand:
+
Ref_name:
OSA-LNCN7084
Sequence
(OSA-LNCN7084.1):
CGCGCGUGCUGUGCAGCCCACGCCGGCCCAACCUGAGCCGCCUCCUCUCCUCUCAGCCCAGCCGGAAAAGUCUACUUUCCCUCCCUUCGCUACUGUUCAUCUUCCAGCUCAGGCAGAGCCCGAGCCAGCCGUGCCGUGCACAGUGCCGCCGCCUCCUCCUUCCAAAUCUCGCCUCCCCGUUGCUCCUUUUUCCAAUUUAGUUGAGGGGAAAUAUUCCUCUUAUCCUCCUCUAUCUUUACCCCCAAAAAUCGGAGCUAAUCGUUGAGUAUUUUAUCCGAAUCGAACUCGUUUUCGAGUUUAUCUCCAAAACCGAGUUUUUGAUUUCCCGGAACGAUUUCUUGCGGGAGGAGUCCGAUCUCUUCAAUCCAAGGCUAUAAAUAGGACCCCAUAGUCUUCCUCUUUCGUUUGCCCCUCUCCCGUGGUCUCCCGUGCCCCGUAGCCUCUCCGCCGCCGCCGCCAAGUUCGCCGCCGCCGCCGGCCGAAAUUCGGCCGUGUCGCGCCGUCGCCUCCGCCGUUGCCGUCGGUCGCCGUCACCGCCGUAAGGUGCGCCGAGGUGUGGGAAAGCUCGGCCGCUCCCUCCCCGCUGUCGCCGGUCACCGGAGCCCCGUCGCCGCCGUCGACCGAAGCCGCGCCGCCGCUAGACCUCGUCGCCGGCCGUCGUCGUUCGUCGUUUGGUUCGAGGGUGAGUACCGUUGGGUUCGUCUCAUCGUCCUCUACGUGUACUUGUCCUCCAAAGUCGCAGCCAACCAUCCAAUCUCCGGCGAGGUCGCCAUCUUGGUCCGGCCAUUGAUGAGGUCAUCACGACGUCAUCAUCGUUUUUCUUUUUCCUGUUUUUCUAAUAGAUUAAAUCUUCGGAAAUUCAUAACUAAAUCAUCGUAACUCGGUUUUGAGUGGUUCAAGUUGCUAAAUUCAUCUAAAAUCAUGAUCUACAUGUUAAAAAUAUCCAUAUGUACUGUUUAUGCUUGUUUUUUACUGUUUAUUUGGUUUUUAUUAGUCUUUUUCUUCGUUUUGCGUGUUAGCUUGUCGUUUCCGUCGUUGCGAAGGUUCGUGAGUGCGUCGGGAAUAUUCAGAAGAUUAAUUGAAGACCGAUUAUUGCAAGUUGAAGACAAGCUGCAAAGGAGAAGACGUUUGGCUUAUACCCCAGUUGAGCUGCCUGUGGGAGUGGAGCUGAAGCCAUCGCUAGACCGUUAAUUCCGCUGCUGUUUUUCUUUUCUUUUGUAAGUAUGUAACGUUAUUAUUAUGAUGGAUUUGUAUAUUAAAUUGUCAGUUUGUAUACCUCGGCUGAUUCCUGGACGAGGAUUUUAUGCACAAAUAAGUUCGGAAAUUACUAGUGAAUUUCCGGGCGUGACAGUUGGGAACCAUCGCAUCCGUUGCCAAGGAGCGCCUAGAGAAGAGGUGCGAUUGCCUUCGGUUGCGAUCCAUCCUUUUAUAUGGAUGAGAUCACCAUGUUGUUUCAUAACACUCCCCCUUGAUCAAAUCCAACUUUGAUCAUUGCUCUUUUAUUGUUCCAUAUAUCUGUAAAGAUAAUCUUAGAAAUAAUUAUAGUUAAAUACAUCACGUAAAACUCCUCGAAAACCCAGUGGGAAAAAUAAGGAGAAAACUGUGAUGUAUUAUUGACUAUUUUAGAUCUAUGAG
Sequence
(OSA-LNCN7084.2):
CUACUGUUCAUCUUCCAGCUCAGGCAGAGCCCGAGCCAGCCGUGCCGUGCACAGUGCCGCCGCCUCCUCCUUCCAAAUCUCGCCUCCCCGUUGCUCCUUUUUCCAAUUUAGUUGAGGGGAAAUAUUCCUCUUAUCCUCCUCUAUCUUUACCCCCAAAAAUCGGAGCUAAUCGUUGAGUAUUUUAUCCGAAUCGAACUCGUUUUCGAGUUUAUCUCCAAAACCGAGUUUUUGAUUUCCCGGAACGAUUUCUUGCGGGAGGAGUCCGAUCUCUUCAAUCCAAGGCUAUAAAUAGGACCCCAUAGUCUUCCUCUUUCGUUUGCCCCUCUCCCGUGGUCUCCCGUGCCCCGUAGCCUCUCCGCCGCCGCCGCCAAGUUCGCCGCCGCCGCCGGCCGAAAUUCGGCCGUGUCGCGCCGUCGCCUCCGCCGUUGCCGUCGGUCGCCGUCACCGCCGUAAGGUGCGCCGAGGUGUGGGAAAGCUCGGCCGCUCCCUCCCCGCUGUCGCCGGUCACCGGAGCCCCGUCGCCGCCGUCGACCGAAGCCGCGCCGCCGCUAGACCUCGUCGCCGGCCGUCGUCGUUCGUCGUUUGGUUCGAGGCUUGUCGUUUCCGUCGUUGCGAAGGUUCGUGAGUGCGUCGGGAAUAUUCAGAAGAUUAAUUGAAGACCGAUUAUUGCAAGUUGAAGACAAGCUGCAAAGGAGAAGACGUUUGGCUUAUACCCCAGUUGAGCUGCCUGUGGGAGUGGAGCUGAAGCCAUCGCUAGACCGUUAAUUCCGCUGCUGUUUUUCUUUUCUUUUGUAAGUAUGUAACGUUAUUAUUAUGAUGGAUUUGUAUAUUAAAUUGUCAGUUUGUAUACCUCGGCUGAUUCCUGGACGAGGAUUUUAUGCACAAAUAAGUUCGGAAAUUACUAGUGAAUUUCCGGGCGUGACAGUUGGGAACCAUCGCAUCCGUUGCCAAGGAGCGCCUAGAGAAGAGGUGCGAUUGCCUUCGGUUGCGAUCCAUCCUUUUAUAUGGAUGAGAUCACCAUGUUGUUUCAUAACACUCCCCCUUGAUCAAAUCCAACUUUGAUCAUUGCUCUUUUAUUGUUCCAUAUAUCUGUAAAGAUAAUCUUAGAAAUAAUUAUAGUUAAAUACAUCACGUAAAACUCCUCGAAAACCCAGUGGGAAAAAUAAGGAGAAAACUGUGAUGUAUUAUUGACUAUUUUAGAUCUAUGAG
Sequence
(OSA-LNCN7084.3):
ACUGUUCAUCUUCCAGCUCAGGCAGAGCCCGAGCCAGCCGUGCCGUGCACAGUGCCGCCGCCUCCUCCUUCCAAAUCUCGCCUCCCCGUUGCUCCUUUUUCCAAUUUAGUUGAGGGGAAAUAUUCCUCUUAUCCUCCUCUAUCUUUACCCCCAAAAAUCGGAGCUAAUCGUUGAGUAUUUUAUCCGAAUCGAACUCGUUUUCGAGUUUAUCUCCAAAACCGAGUUUUUGAUUUCCCGGAACGAUUUCUUGCGGGAGGAGUCCGAUCUCUUCAAUCCAAGGCUAUAAAUAGGACCCCAUAGUCUUCCUCUUUCGUUUGCCCCUCUCCCGUGGUCUCCCGUGCCCCGUAGCCUCUCCGCCGCCGCCGCCAAGUUCGCCGCCGCCGCCGGCCGAAAUUCGGCCGUGUCGCGCCGUCGCCUCCGCCGUUGCCGUCGGUCGCCGUCACCGCCGUAAGGUGCGCCGAGGUGUGGGAAAGCUCGGCCGCUCCCUCCCCGCUGUCGCCGGUCACCGGAGCCCCGUCGCCGCCGUCGACCGAAGCCGCGCCGCCGCUAGACCUCGUCGCCGGCCGUCGUCGUUCGUCGUUUGGUUCGAGGGUGAGUACCGUUGGGUUCGUCUCAUCGUCCUCUACGUGUACUUGUCCUCCAAAGUCGCAGCCAACCAUCCAAUCUCCGGCGAGGUCGCCAUCUUGGUCCGGCCAUUGAUGAGCUUGUCGUUUCCGUCGUUGCGAAGGUUCGUGAGUGCGUCGGGAAUAUUCAGAAGAUUAAUUGAAGACCGAUUAUUGCAAGCAUGGUUCAUUGCAGAGCACCAGACGGAGAAGUGGCGGAGAUAAGCCCACGGGGGUCGCUGGGGAGUCCAUGCCUUGUUUUAUAAGGGGGUGAUUACGAUCCAGGAAUGGUGCACUGUGUUGAAGACAAGCUGCAAAGGAGAAGACGUUUGGCUUAUACCCCAGUUGAGCUGCCUGUGGGAGUGGAGCUGAAGCCAUCGCUAGACCGUUAAUUCCGCUGCUGUUUUUCUUUUCUUUUGUAAGUAUGUAACGUUAUUAUUAUGAUGGAUUUGUAUAUUAAAUUGUCAGUUUGUAUACCUCGGCUGAUUCCUGGACGAGGAUUUUAUGCACAAAUAAGUUCGGAAAUUACUAGUGAAUUUCCGGGCGUGACAGUUGGGAACCAUCGCAUCCGUUGCCAAGGAGCGCCUAGAGAAGAGGUGCGAUUGCCUUCGGUUGCGAUCCAUCCUUUUAUAUGGAUGAGAUCACCAUGUUGUUUCAUAACACUCCCCCUUGAUCAAAUCCAACUUUGAUCAUUGCUCUUUUAUUGUUCCAUAUAUCUGUAAAGAUAAUCUUAGAAAUAAUUAUAGUUAAAUACAUCACGUAAAACUCCUCGAAAACCCAGUGGGAAAAAUAAGGAGAAAACUGUGAUGUAUUAUUGACUAUUUUAGAUCUAUGAG
Sequence
(OSA-LNCN7084.4):
CUGUUCAUCUUCCAGCUCAGGCAGAGCCCGAGCCAGCCGUGCCGUGCACAGUGCCGCCGCCUCCUCCUUCCAAAUCUCGCCUCCCCGUUGCUCCUUUUUCCAAUUUAGUUGAGGGGAAAUAUUCCUCUUAUCCUCCUCUAUCUUUACCCCCAAAAAUCGGAGCUAAUCGUUGAGUAUUUUAUCCGAAUCGAACUCGUUUUCGAGUUUAUCUCCAAAACCGAGUUUUUGAUUUCCCGGAACGAUUUCUUGCGGGAGGAGUCCGAUCUCUUCAAUCCAAGGCUAUAAAUAGGACCCCAUAGUCUUCCUCUUUCGUUUGCCCCUCUCCCGUGGUCUCCCGUGCCCCGUAGCCUCUCCGCCGCCGCCGCCAAGUUCGCCGCCGCCGCCGGCCGAAAUUCGGCCGUGUCGCGCCGUCGCCUCCGCCGUUGCCGUCGGUCGCCGUCACCGCCGUAAGGUGCGCCGAGGUGUGGGAAAGCUCGGCCGCUCCCUCCCCGCUGUCGCCGGUCACCGGAGCCCCGUCGCCGCCGUCGACCGAAGCCGCGCCGCCGCUAGACCUCGUCGCCGGCCGUCGUCGUUCGUCGUUUGGUUCGAGGCUUGUCGUUUCCGUCGUUGCGAAGGUUCGUGAGUGCGUCGGGAAUAUUCAGAAGAUUAAUUGAAGACCGAUUAUUGCAAGAGCACCAGACGGAGAAGUGGCGGAGAUAAGCCCACGGGGGUCGCUGGGGAGUCCAUGCCUUGUUUUAUAAGGGGGUGAUUACGAUCCAGGAAUGGUGCACUGUGGUGAGUUGUGUUGUGUAGAGGGUAUUGUCACAGCCUCUAUUCGGGUACUUUCCAGUAUCGUGACGUAUGGUAGACAUGAUGUUGAGGCUAUGUCUUGUUGGUACAGUGGUACACCUUUGGCCAGAGUAAAACUAUUCGAAUAGCCGUGCCCGCGGUUAUGGGCGGGUUGAGCAAUGUUUUUCGUGAUUAGUCUCACACCUCUCACAAUAAUUAUUGAUGCUAUAACUGGUAAUAAUUUGUUUAGCUCCUGGUUUGGAGUUAGAUCUGUAUAGCCGGGUAUGGUUGUUCAGGAUGGUUGGGCCUGUGCAGCAUGGGUGUGCUGUUCAGUGUUGAUUAAAAUUUCUGAUUAAUUACUCUACUGUUUUACUACUCUUAACUCUUUGCUAAAUGCUGCUUUCGCAAAUGAGACUAUAUUGUGCCAUCCUUUGGUAUCCUUGUGCAUUUGCAUAUUUGUUGUGUGGCUUAUUGAGUAUGUCAUAUGCUCAUUCUUGCAAUAAUCAAUCAACCUCAGUUGAAGACAAGCUGCAAAGGAGAAGACGUUUGGCUUAUACCCCAGUUGAGCUGCCUGUGGGAGUGGAGCUGAAGCCAUCGCUAGACCGUUAAUUCCGCUGCUGUUUUUCUUUUCUUUUGUAAGUAUGUAACGUUAUUAUUAUGAUGGAUUUGUAUAUUAAAUUGUCAGUUUGUAUACCUCGGCUGAUUCCUGGACGAGGAUUUUAUGCACAAAUAAGUUCGGAAAUUACUAGUGAAUUUCCGGGCGUGACAGUUGGGAACCAUCGCAUCCGUUGCCAAGGAGCGCCUAGAGAAGAGGUGCGAUUGCCUUCGGUUGCGAUCCAUCCUUUUAUAUGGAUGAGAUCACCAUGUUGUUUCAUAACACUCCCCCUUGAUCAAAUCCAACUUUGAUCAUUGCUCUUUUAUUGUUCCAUAUAUCUGUAAAGAUAAUCUUAGAAAUAAUUAUAGUUAAAUACAUCACGUAAAACUCCUCGAAAACCCAGUGGGAAAAAUAAGGAGAAAACUGUGAUGUAUUAUUGACUAUUUUAGAUCUAUGAG
Sequence
(OSA-LNCN7084.5):
CUACGUGUACUUGUCCUCCAAAGUCGCAGCCAACCAUCCAAUCUCCGGCGAGGUCGCCAUCUUGGUCCGGCCAUUGAUGAGCUUGUCGUUUCCGUCGUUGCGAAGGUUCGUGAGUGCGUCGGGAAUAUUCAGAAGAUUAAUUGAAGACCGAUUAUUGCAAGAGCACCAGACGGAGAAGUGGCGGAGAUAAGCCCACGGGGGUCGCUGGGGAGUCCAUGCCUUGUUUUAUAAGGGGGUGAUUACGAUCCAGGAAUGGUGCACUGUGGUGAGUUGUGUUGUGUAGAGGGUAUUGUCACAGCCUCUAUUCGGGUACUUUCCAGUAUCGUGACGUAUGGUAGACAUGAUGUUGAGGCUAUGUCUUGUUGGUACAGUGGUACACCUUUGGCCAGAGUAAAACUAUUCGAAUAGCCGUGCCCGCGGUUAUGGGCGGGUUGAGCAAUGUUUUUCGUGAUUAGUCUCACACCUCUCACAAUAAUUAUUGAUGCUAUAACUGGUAAUAAUUUGUUUAGCUCCUGGUUUGGAGUUAGAUCUGUAUAGCCGGGUAUGGUUGUUCAGGAUGGUUGGGCCUGUGCAGCAUGGGUGUGCUGUUCAGUGUUGAUUAAAAUUUCUGAUUAAUUACUCUACUGUUUUACUACUCUUAACUCUUUGCUAAAUGCUGCUUUCGCAAAUGAGACUAUAUUGUGCCAUCCUUUGGUAUCCUUGUGCAUUUGCAUAUUUGUUGUGUGGCUUAUUGAGUAUGUCAUAUGCUCAUUCUUGCAAUAAUCAAUCAACCUCAG
Sequence
(OSA-LNCN7084.6):
UCGCCAUCUUGGUCCGGCCAUUGAUGAGGUCAUCACGACGUCAUCAUCGUUUUUCUUUUUCCUGUUUUUCUAAUAGAUUAAAUCUUCGGAAAUUCAUAACUAAAUCAUCGUAACUCGGUUUUGAGUGGUUCAAGUUGCUAAAUUCAUCUAAAAUCAUGAUCUACAUGUUAAAAAUAUCCAUAUGUACUGUUUAUGCUUGUUUUUUACUGUUUAUUUGGUUUUUAUUAGUCUUUUUCUUCGUUUUGCGUGUUAGCUUGUCGUUUCCGUCGUUGCGAAGGUUCGUGAGUGCGUCGGGAAUAUUCAGAAGAUUAAUUGAAGACCGAUUAUUGCAAGAGCACCAGACGGAGAAGUGGCGGAGAUAAGCCCACGGGGGUCGCUGGGGAGUCCAUGCCUUGUUUUAUAAGGGGGUGAUUACGAUCCAGGAAUGGUGCACUGUGUUGAAGACAAGCUGCAAAGGAGAAGACGUUUGGCUUAUACCCCAGUUGAGCUGCCUGUGGGAGUGGAGCUGAAGCCAUCGCUAGACCGUUAAUUCCGCUGCUGUUUUUCUUUUCUUUUGUAAGUAUGUAACGUUAUUAUUAUGAUGGAUUUGUAUAUUAAAUUGUCAGUUUGUAUACCUCGGCUGAUUCCUGGACGAGGAUUUUAUGCACAAAUAAGUUCGGAAAUUACUAGUGAAUUUCCGGGCGUGACAGUUGGGAACCAUCGCAUCCGUUGCCAAGGAGCGCCUAGAGAAGAGGUGCGAUUGCCUUCGGUUGCGAUCCAUCCUUUUAUAUGGAUGAGAUCACCAUGUUGUUUCAUAACACUCCCCCUUGAUCAAAUCCAACUUUGAUCAUUGCUCUUUUAUUGUUCCAUAUAUCUGUAAAGAUAAUCUUAGAAAUAAUUAUAGUUAAAUACAUCACGUAAAACUCCUCGAAAACCCAGUGGGAAAAAUAAGGAGAAAACUGUGAUGUAUUAUUGACUAUUUUAGAUCUAUGAG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
49.19%
ME_num:
MEP:
50.61%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.84
Avg Expression:
2.22
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Caidao // leaf // none (control)--/--Caidao // leaf // 0.5% Na2CO3 solution for 36h | -5.66084797777767 | 0.00128174663838103 |
| 2 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | -1.29528325159807 | 0.00494371935685677 |
| 3 | WD20342 // leaf // none (control)--/--WD20342 // leaf // 0.5% Na2CO3 solution for 36h | -2.42406173613167 | 0.0229617665048504 |
| 4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | -2.39919141240437 | 0.0321362957149393 |
| 5 | Nipponbare // panicle // AM--/--Nipponbare // panicle // PM | -1.95617634155448 | 4.78094438434304e-05 |
| 6 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | 1.49168221128739 | 0.000208811236382449 |