Chr:
Chr8
Start:
6006664
End:
6007108
Strand:
+
Ref_name:
OSA-LNCN6923
Sequence
(OSA-LNCN6923.1):
UUUUGAUCCAAUACAAAGGAACACUUAAAACAUAUUGGCUUAAAUAUUGAAAAAAUGGGAAAAAAAUAGUCUCAACUACUUCCUCCUCUGCGGUGACCGGGCAUCGCUAGACUUGGCACUAGUUCACUGCAGUUGUGUUGUGCUCUGCGUGGGCCAUUAAAGAAGCCAAGGCCAAGCUCGUCCCGUUGCCAUUGAGGACGGGUGGCUACUGAUGUUGUGCCGCAUCGCCGUUGAGGAAGCCGAGGCCGACCGAGCCACCUUUGAGUAAGCUGAGGAGGCUGUCGUCGAGGACGAGCGUGAGAGGCCACCGUUGUCGAGGACGAGAGCCUCAUCACUGCUCGUGAUGAGAUAGUGGAGAGAGAUAAGGGGGAGAGAGAGAGAGAGAGAGGGAGAGAUGAGAUAAGAUUGGAGCUGUUGUG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
72.97%
ME_num:
MEP:
23.98%
HE_num:
HEP:
2.85%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.85
Avg Expression:
2.25
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // shoot // No_DIS;Fr13_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | -2.45189515179622 | 0.0499469106651188 |
2 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | 2.67867236055745 | 0.000318987363225728 |