Chr:
Chr8
Start:
3820386
End:
3821346
Strand:
+
Ref_name:
OSA-LNCN6878
Sequence
(OSA-LNCN6878.1):
CGGCGAUGGGCGGCGGGCGGCGGCGUGCUGGGGCGGGCGGGCGGUCGGCGCGCGUGGGCCGGCGGCGGAACGCGGGGAGGUCGCGGCGGGCAACGGGUGGCGCCGAGGAGGCCAGGAGGGUGUUGGAGGCGACGGGCUACGGCGACAGAUCCACCACCCUCUCGAGCUCCGCGGCUACGGCGACGAGGCGACGAGUCCUCUGCUCAGGCGGGCGCCGUCGAGGUCAUCCUUCUAGUCGGAGGCGGCGGAGAGAGGCGGCCGGCGAUGAAACCUCCUCGGGGAUGGCGCGGCGAGCGGCGCGCGUUGUGCGGCGCUGAGGAGGGCAUUGGAGGCGGUGCGCUACGGCGACGAGUUCGCCGCCCGUCCACGUCGUCCCCAUCGACCGUCGUCGCUGUUAACCGGAGCCACACAGCCGCGCCAUCGAUUUCCCCUCCCCGGCCGUCGCGCCUGCCGCUCAAGAUGUCACCUGAUUCUUCUGCUGCUCCUAGUGUUCCCAAAUUCGCUGCUGCUUCUGUAAAACUACCCCGUCACACCGGCAAGCAGCACACAUCUGUACAACCUGUGUCCAUGCAUAUACACCGAGCGAGCUAACCGAGCCGAGCCAAGCAGCAUCGCCAUGCGCACCGCCGCUCGCCGCCGCACUUCUUGCCGCCGCCGCCAUGGAUGAGGUUGCUGCGGCGGCGCAUGGGGCAGACGGAAGGGUCGGCGAGGAUGGACGGCCGCACGCUCGAGCUCUGCAUUUUUUCCCUUCCCUUCUCUGCUUCUCUCGUUGGCGUGGUGGAGGCGGCGAACGGUCCGUCGUCCUGGUCGUCGGCAUCGUGGCCGUCCAACCACGUCCGCCGGCGAACGCAGAGCAAGCUCGGGCGACCGGCGAUGGAG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
40.04%
ME_num:
MEP:
55.28%
HE_num:
HEP:
4.47%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot_apical_meristem
Tau :
0.82
Avg Expression:
4.62
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | IR64 // panicle // Dawn--/--IR64 // panicle // Dusk | 2.25091586965148 | 0.027927712034709 |