Chr:
Chr8
Start:
3646074
End:
3646876
Strand:
-
Ref_name:
OSA-LNCN6875
Sequence
(OSA-LNCN6875.1):
GGAAUUUUUUUUAAAAGUAAUAUGAUUUUAAUGGAAAAUCGCAAAACUAUAGGUCAGUUAGGCGAAAUCGCAAGUUUAGCACCCUAUCGAACAACCGUGGUUCGACAAGGUACCUAUCGAACAACCACAGUUCGAUAGGGUACCUGUCGAACUGCGGUAGUUCGACAGGUGAUUAAAAAAAUCAAAAAAAGAGAAAAAUCACUGUUGCAUACUGUUCACAAUACCCUAUCGAACUAAGGCAGUUCGAUAUGUGUCUGCGAGCACUGUAGCAUCACUGUAGCAUCACUGUUCACGCAACCCUAUCGAACUUUGGCUGUUCGAUAUGUCCCUGCCUAGCAUUGUAGUGAUACUGUUCAUGUAAUUUUUUAUUUGUUUUUGGACCACCUA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
89.43%
ME_num:
MEP:
10.37%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.94
Avg Expression:
0.90
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 4.48244728812973 | 0.0168293690341273 |
| 2 | Nipponbare // root // "mock,1_day"--/--Nipponbare // root // "auxin(50CM_2,4_D),1_day" | 1.55741972857465 | 0.0114775046441471 |
| 3 | Nipponbare // root // "mock,7_days"--/--Nipponbare // root // "auxin(50CM_2,4_D),7_days" | 1.89724612041879 | 0.0315585292898043 |
| 4 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | 4.38719098694457 | 0.0264233262661217 |
| 5 | Nipponbare // shoot // No_DIS;_mock_inoculated--/--Nipponbare // shoot // No_DIS;Fr13_inoculated | 5.25202013148169 | 0.00164289902660593 |