Chr:
Chr8
Start:
2303036
End:
2304043
Strand:
-
Ref_name:
OSA-LNCN6841
Sequence
(OSA-LNCN6841.1):
AUGAUAAUAUAAGAAUACAUAUUUUUACUACCAAUUUUGUUUUGGUUACUUCAUCAUUAUUAUAGAGCUUAUCAACCGUGGACCAACCAAUCAAACACUGGAAUUUUCUACAAAGAAGAAAAAUCUUAAAAAUCUUAAAAGAUUCUAAGGAGGAAAUAUGUAGGGCCUGGCAGUAGAAUCCAAUAAUCAAGAUGGAACAAAACGCUGCAGAAGAAGGGGCAGGGUACAGUGGUGGUGUGCUACAAGAGCGCUGGAGAAGUCAAUGGCAGAGCUUGCGAGGCACGUCGGAUCGACAGGGACAAUUUCGCAUACAUUUCGAGCGAGCUCUUGUCAGCUGCUGCUCAGGUUGCUAGCGACAAGCAUGGUGACACUGAUCCGGUCAAUCACGAGUCACGAGCCGUGUUCUUCUUCCCGGAGCCAAGAAGAUGCCUCAGGCCCUCAGCUCUUUUCUCGUUGAGAUACAUAUUUUAUCUCGAUUUUUCUGUUAGCAUGUUUUUUAAAUUACUAAACAGUGUGUUUCGUGUGAAAACUUUAUAUAUAAAAGUUACUUUAAAAUAUCAAAUAUAUUCGUUUGUUAAAUUUGUAAGAAUUACAACUUAAUUAAUAAUGUGCUAAUAGUUUUUUUUACGUAAGUCA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
96.95%
ME_num:
MEP:
2.85%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
embryo
Tau :
0.96
Avg Expression:
0.43
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN | -6.79371865671903 | 1.44064508809014e-06 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hN | -6.89783055621264 | 6.56732442636474e-07 |
| 3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | -7.04652237326801 | 3.24850337471102e-07 |
| 4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA | -6.03058343269887 | 5.97427451888707e-05 |
| 5 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN | -6.28618793723153 | 1.11104930237645e-05 |
| 6 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN1dA | -6.4534393898185 | 6.2137894721067e-06 |
| 7 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 1hA | -1.55936544668844 | 0.0484231460479097 |
| 8 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 3hN | -2.16428167649251 | 0.00431515623213949 |
| 9 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | -7.15926399755399 | 1.88230333319583e-07 |
| 10 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 3hA | -3.90858966910082 | 0.000109821555765988 |
| 11 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dA | -6.86061936713208 | 5.26990287389232e-07 |
| 12 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | -7.33894665944417 | 7.79709520842973e-08 |
| 13 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hA | -6.74815282546411 | 1.69595663738061e-06 |
| 14 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | -7.48134110539981 | 2.61476620167071e-08 |