Chr:
Chr8
Start:
2229222
End:
2230211
Strand:
-
Ref_name:
OSA-LNCN6839
Sequence
(OSA-LNCN6839.1):
CCUCCCCUUUAUGUUUAUUUCUUCUCAACUUUGGUAGUUUUGUCAUAUACAUCCAAAUAUACAUCAACACUCAUAAAAAUUAUUAGAAAUAAACCCUACCACUAUUCUGGAUGUUUUAUACUUUCAUAUUUAUGCAGGUAUUUGAUAGUGUAAAAUUGGUAUUUAACAACCGUCAACAACCGCCUCGCCGGACGCCGGCCGCUCGGCCGGUUGCCGGCUUGGCGGCUUGCCGCUGCCGCAGGCCCACAGCGGCGCAACGCUGCCGCCCGCCUUCUCCUGUCUGCCCAUCUCCGUUCCCAUCCGGACUCCUUCUCAGCUGCUCCAUGCCUCCACCGAUCCGGCGCUCCACCCUUCAGCCCAGAAGAAACGAACAGGACCGCAUGUUGCUUAUCUUCGGAUGAGGUCAUUGGUAAUGAAGCUCCUGAACCUGGAGAACCACC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
95.33%
ME_num:
MEP:
4.07%
HE_num:
HEP:
0.41%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.99
Avg Expression:
1.16
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 2.80125549582314 | 6.63035029449143e-05 |
2 | Nipponbare // shoot // No_DIS;_mock_inoculated--/--Nipponbare // shoot // No_DIS;Fr13_inoculated | 2.82541775283707 | 0.0127536168926225 |