Chr:
Chr7
Start:
28282656
End:
28285626
Strand:
-
Ref_name:
OSA-LNCN6760
Sequence
(OSA-LNCN6760.1):
AUACAUACCCUGCAUAUGUGUGGAUCCAAGGCCUUGUCGAUCUUGUGGACGAGCGUGUUCAUCUCGGCCUGGAAGUCGUCGUACAAGGGCUUGACGUCGGAGUUGAAGGCGUACUCGGCGAGGCUAUCCAUGGGCGCCCUGUGGCUGACGGCUUCCAGGGCGUCGUCCAGCAAGACGUGGGUCACCGCCGCGAGGCCUCGCAGCGCUCGCAGAUAAUCGGAUGGUCGUCGCGGCGGCGCCGGCGGUGCGCCGCCGCCGUCGCCUUUCUGGCACUGCACCGCCGUCAGAGGCGGUCGGGCGGCCGUCGUUAUCCUGCAGGACUGCGUCGUCGUCUUCAGUCUUGGGAGGCAGCAAUUACGUUGGCUCGCCGCCGGCGAGAUGGCCGGCGAGGUAAGCGGACUCCUCCUGAUCGACAAUGCCGUCGCCGGCGAACACGAAAAGAGACAGCUCUGCAGCGUGGUGGCCAUGGCGAUCGAGCAGAUUGUUGGACACGAUCGAGAACAAUGUACUGUUCCAAUUGCAGAAAGUGGCGAUCAAGUAGCUUGUCGGCCACGAUCGAAACAAUGUACUGUUGCAAUUGCAGACUCAGAGAGUUAGUGACUGAUAGUAAGCUAUUUAUUAUAACUCAUCUAGCCAGAUAUAUCCGACUCGGAUUAGUAGUUUAUGUCCAGUCGGCCGGAG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
69.11%
ME_num:
MEP:
26.22%
HE_num:
HEP:
4.47%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.98
Avg Expression:
16.00
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | -1.93155918329436 | 0.028627692820068 |
| 2 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | -7.07877285310518 | 6.09961819423931e-07 |
| 3 | Nipponbare // panicle // AM--/--Nipponbare // panicle // PM | -5.76173743097673 | 1.93016003676931e-07 |
| 4 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | -5.77456083872377 | 0.000803181219171784 |