Chr:
Chr7
Start:
28051165
End:
28054268
Strand:
-
Ref_name:
OSA-LNCN6756
Sequence
(OSA-LNCN6756.1):
CGCUAGUUGAUAGCCAGCUUAUGAAAAUAUGGCCGGAAAGCUGAGUUUUUAAGUUUCUGUUUUUUAAUUCAUUUUCUAAAUUCUAUAACUACAAAUUCUUAGAAUUUAGGUGACAAACUAUAUUGUUUGGAAGAGCCAGAGAUUCCACGAGAAACUGUAACUGAUAGAAACUCUUUCCGACAGGCACAUAAGAAGAGAUAGUGUAGUGUGUAGUGGGCAGAGUCCAUGAAGGUCUGCAUUCGAAUGAGCCGCCGAACGCAUUUAACCUCUUCUCAAUACAUAUCAAUAUGAAAUGCCCCUCUUUUCAUAUCCAAAAUAUUUUCUAAAAUGAAAUACAGAGUGAGGAGAAAG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
83.13%
ME_num:
MEP:
14.84%
HE_num:
HEP:
1.83%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
carpel
Tau :
0.87
Avg Expression:
1.90
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 5.25536141993234 | 0.00298637748375333 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dA | 5.37477845390482 | 0.000185558823215062 |
| 3 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | -2.79566544514812 | 0.00183765951704785 |
| 4 | Nipponbare // shoot // No_DIS;_mock_inoculated--/--Nipponbare // shoot // No_DIS;Fr13_inoculated | 4.04318288086539 | 0.005797957213237 |
| 5 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | -2.60838407704528 | 3.72432523240096e-09 |
| 6 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | -2.28768515057797 | 0.0159404277041239 |