Chr:
Chr7
Start:
25598899
End:
25599678
Strand:
.
Ref_name:
OSA-LNCN6715
Sequence
(OSA-LNCN6715.1):
UACCGCUUUAUCCUUGGAGGCAUGAACUGACCUAAAGCUCUACCGUUCCCUAUCCAUUCCCCAUUCCCCAAUCCAUGACAGGCGGCAGCGGCGGAGGCUCUAGCAAGCCAGUGCGGCGAGGCAAACGGGCGGCGGCGGGGCAAGUCCUCGUGGCGAGCCGGUGGCAAUGGGAGCAGCUAGCUGCAACCUGCAGGGCGAAAAGGCGGUUGCGCAAGCAGGCAAGGUGAGGCGAGCAGGCGGGCACGCCGGAGCAACCAGUUGCAAGGCGAGCAGGUAGCGCCGGCAGCGGCGUGGCUCCGCGAGGGAAACGGGAGGCGGCGACUCCUUUGAGCCUGCGUAGCGAGGCAGGACUGCAGGAGGCACCGGCGGCUCCGCGUGGCGAGCCGAUGAAGGCAAGCAGGGCAGCACUGUUAGUGCUCAGCAACAAAUCUGGAAUGCUUGUUUAGCUUCUUGAUGAAAACAUUAAUUCCGAAUGCUGCUUUUACUUUGUGGUAUUUUGUGAGGCUUCUUUUGCAUGAAUAUUCGUGCCAUUUUGUCUUUGUCAUAUUAUCAAGGUUGCUAGAAGUUCGUCAAAUAUCAGUACAAAACGGGGGCAAAUUUCAUGUCAAACUCCAUCCUAUCCAAACAGGGGGAGAUACACAUUUCAAUAUAGAGACGUAGGGCAAAUAUGCAAUACCAAACAAGGGUAUAUAUGUCAUUUCACCACUGAUUUAAC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
95.33%
ME_num:
MEP:
4.47%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.94
Avg Expression:
0.78
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 6.72466212526386 | 6.32243968016279e-07 |
| 2 | Nipponbare // shoot // No_DIS;_mock_inoculated--/--Nipponbare // shoot // No_DIS;Fr13_inoculated | 5.83773643638285 | 9.7142577882747e-05 |