Chr:
Chr7
Start:
9105054
End:
9114600
Strand:
-
Ref_name:
OSA-LNCN6372
Sequence
(OSA-LNCN6372.1):
GACGGUUUCUACCAUACACAAGAUGAUCGAUUAGACAGUUUCUGCUAUACAGGACUGAACGACUGAUUGAUUGUUCUUUUUGGAGGAUUGUUUAGUGGUUGGUGUUAGAGUUUAAUCGUGCUUAAUUACUUUAAUUAUUUCAGGUAUUAGCCUAAUAAUGAUCACCUCUCCUUAAUUAUGCGGAAAUUGAUUUACUGACCUUGUUUUGAAGCCAAUCCAUAAUUUUUCUGCUGUUCUUCUCAUUUAUUAUCUUAACUAUGUUGUUGUUGUUCUUCUUUCUAUUCCUUAUUGAUUCACCUGCACGGAGUGAGUUGUACUACGAACCCUUCUAGUGCUUUUAAAUCAAUCGGGUUCUUUUUAGGAUUUUGGGUUUUAG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
21.75%
ME_num:
MEP:
73.58%
HE_num:
HEP:
4.47%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.95
Avg Expression:
37.37
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | -2.69772992569078 | 0.0384970460141978 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | -2.34999701392852 | 0.029657771180756 |