Chr:
Chr7
Start:
6401128
End:
6401589
Strand:
.
Ref_name:
OSA-LNCN6278
Sequence
(OSA-LNCN6278.1):
AGGAGGAGGGCAGACACCUCACCCUCGGGCCCGACGUCCCCGAAGGUGCCAGGCCGCGUGGGCGAUUGUGUCUGCCUCAAGCCUCUGGUCACGAUACCCCCGGUCCCAUAUCACCGACAGUAGCCCCCGGCGUUAUGCCAGGGCGAUCGCCCUUCUCAAGGGAAGCGGUCGGGCGUAACGCCACUCCUAAAGCUUGGUGACAGGUGGGACCGGUUUCCAUGGUUGCGCAGAAACCCAACGGUCUCAAACCAUGCACAUCGGUAAUGGUAACUUGGCUGUCCAUAAUGGGCGGUCUCUUCAAGACUGCCACAUCACUUGAGCAGCGCACGAAUCUGGGUGAGCUGAUUUGCUUCGCCUGGAGAUAUGGUAACGUCGCUUCGGUCGGCGAGCGUAAUUAACGCGCGCACGAUACGAUCUAUCUCGACUGCCGCAACCGCACAUCCACUUCAUGCGCCGCAAGCG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
93.09%
ME_num:
MEP:
3.25%
HE_num:
HEP:
3.46%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.96
Avg Expression:
2.33
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | WD20342 // leaf // none (control)--/--WD20342 // leaf // 0.5% Na2CO3 solution for 36h | 9.93165181694522 | 2.03541504795369e-10 |
| 2 | 9311 // leaf // control--/--9311 // leaf // salt | 3.69969257870933 | 0.00256669260346989 |
| 3 | 9L136 // leaf // control--/--9L136 // leaf // salt | 3.60926664369573 | 2.09474830911064e-05 |