Chr:
Chr6
Start:
26080400
End:
26081712
Strand:
+
Ref_name:
OSA-LNCN6080
Sequence
(OSA-LNCN6080.1):
CGGAGAGGCGAGCGCGGCGGCGAGGCAGCGGCGAGCGCGGCGGAGAGGCGAGAGCGGCGGAGAGGCGAGCGCGGCGGCGAGGCAGAGGUGAGCGCGGCGGAGAGGCGAAAGCGGCGGAGAGGUGAGGAGGCGGCGGCGGAGGAGAGGCGAAAGCGGCGGAGAGGCGAGGCGGCGGCGGAGGAGAGGCGAGCGCGGCGGCGGCGGAGGCGAGCGCGGCGGAGAGGCGAGGCGGCGGCGGCGGAGAGGUGAGCUCACGCGAGGCGUUCCGGCCACCGGGGUGGGAGAUUCCGACGACGACGAGGACUAGAUCGUGUCGGUGUCGGAGUCGUACAGCUCCAUGAUCUCCGGUAUGGUGAUGCGGCGGUCGGGGUCGGGCUGGAGGCGAGAGCGGCGGCGAGGCAGAGGCGAGCGCGGCGGCGGGACAGGGCGGCACAGGGGCGGGCUUGAGCGGCGGCAGCGGUGCGGCUGGGUGGCGACUGGCGGCACGAGGCGAGGCGCGCGACUGACCGCCGCCUCGCCUCGCCUCCUCGGCCGCCCGUUGCCGGCCCUCGCGUGCCGACCGCCCGCGCUGCCGCCCGUCGCCGGACCUCGCGAGCCGACCGCCCGCGCCGCCGUCUGUCGCCGGCCCUCGCGAGCCGACCGCCCGCACCGCCGCCCGUCGGGGUCGACGCCGUGGCCGUCUCCUCCUUCGUCGGCUCCAUGUCCGCUGCAGAUCGAUCGAACGACGACGACGUCGCCUCGGCCUGGGCCCUGACGACGAGCGCGACAGCACGCCGGCGAGUCGGGAAGCCAACCGCGGCGCGGCCAGCAGCACGCGCUCGCCACCGCUCCCCCCUGCCCCCGCCCCCGACCCCGCGCCGCCCCGACCCCGCGCCGCCGCGCCGACACGACGUUCUUGAUUUGGUUCGGCCGCCGCACCGACACGACAAGUGGGCUCGCCGCCGCCGCCUCUUCCGCCGCCACCGCCGCCUAUUCUGUCGCCUGCCUCAGUGCGCCAAGGAGCGAGAGAGAGAGGGGAAGGGGUGAAGAGAAGGGGAGAAGAAAAGGGAUUGGGCUGACAAGUGGGUCCCAUAUUUUAUUUUAUCUAUUUUGGCUGACUAGACUGCCACGUAUGCGUCCACGUAGGACCAAAACCGCCCUGAAUCGAUCUAGGGAACUAAUUCAUCCGGUUUACAAAGUUUAGGGUCAAAAAUAACUGGUAUUGAAGUUUAGGGUGGUAAAUCGGACAACCGCAAUUGUUCACGAGUGCAAUUCGUACUUUUUCCUACAAUUAAACAGCUACAUGUCCCU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
47.36%
ME_num:
MEP:
46.54%
HE_num:
HEP:
5.89%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
crown
Tau :
0.87
Avg Expression:
6.71
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // shoot // No_DIS;Fr13_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | -1.99054661891061 | 0.0151304544054553 |
| 2 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | -2.31955996655813 | 2.98001938133097e-09 |
| 3 | Nipponbare // shoot // "Control,22C for 10 min, then 30C for 1h50 min"--/--Nipponbare // shoot // "Heat,42C for 10 min, then 30C for 1h50 min" | 5.13621953939304 | 0.0159612109815213 |
| 4 | Nipponbare // root // "mock,1_day"--/--Nipponbare // root // "auxin(50CM_2,4_D),1_day" | -2.17492866309838 | 0.00730945216808364 |
| 5 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | 3.0851216683317 | 9.01405630540885e-60 |
| 6 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | -1.63204076927892 | 0.00240835354610119 |