Chr:
Chr6
Start:
22372880
End:
22373599
Strand:
-
Ref_name:
OSA-LNCN5981
Sequence
(OSA-LNCN5981.1):
UCUCUCUCUUUCUAUCCUUUCCCCUCACUCUCUCUUUCUUUCCAACUCUCUUUCUCUCCUCUCCACUCCUCCUCGAGCACGGCGGUGGCUAGGGCGGCUUGGCCCGGAGCUAGCGGCGGUGGCGACCUCGGGCGGCGGCGCCACCGCCAUCUCCUCCUCACCGCCGCCGCCGCCGACGAGGAGGAGGCGAUGGGCCAGAUCCGGCCGCGCCGGUCCUCGUCUCGCCCGGAUCCGGAGGCAGCGGGCCUCGUCCUGCCCGGAUCCGACGGCGACCUUGGGCGAAGAGUGCCGCGGCGACCUCGGGAGGCGGGAGCGGCUGGCAGUGGAAGCGGCAGAGGGCGGCGGCGGCAGCGAGGCGAGCAGCGGCGGGAGCGGGGUGGGCGGCGGCAGCGAGAGCGGGGACGGGCGGCGGGGGCGGGAACGGGGGUGGGCGGCGGCGGCGGGAGUGGGGGCGAGCGGUGGAGCCGGGAGUGGGGACGGGCGGCGGUGGGAGCGGGAACAGGUGGCGGCAGGAGCAGCCAGCGAGCUCGGGUGGCGGCUAGGGUUUCGUUUUUUCUUAUUUUUCGCAUGCGGGUGCCCUGGCCGCAUGCAAAGAUGGCGAUCUUUGC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
98.17%
ME_num:
MEP:
1.02%
HE_num:
HEP:
0.61%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.97
Avg Expression:
0.53
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Caidao // leaf // none (control)--/--Caidao // leaf // 0.5% Na2CO3 solution for 36h | 9.45061592589706 | 6.45814494868753e-07 |