Chr:
Chr6
Start:
17216640
End:
17220090
Strand:
-
Ref_name:
OSA-LNCN5873
Sequence
(OSA-LNCN5873.1):
GUGAGCACAUUAAUUUUCUAAAAUAAAUAUGGUAGAUGUCCGGUUCUUAUUUGCGAUCGAAACGUCUACAUGUUCUUAAUCUAUCUCGAUUAUUAAAAUCAGAUCGAUGAGAGCCGAAACACGGCUAUGAUCAGACUGCAUUUAUAUAAUCAAUGGCAUUAGGUUGAUUCGGCCCUGAUUGGCAAUUGAAUCAUCUGAGUGCCAUUUGAUAUUUUCAUGAUUGAAACUAGACGUCUGGCACUCAUUGGAGAUCGGAUCGUCUAUCAAUUACUAUGAUACCAAUAACAAUGGUACUAGAUAUGUCUAGCCCUCAUUUGCGAUCGGACUGUCUAGACGUUGUUUUCAUAAUUAAAAUACAUUUUGAUGCAUGGGAGCUGUUCUUGACUCAUGCAUACGCCAAUUACGAAGGCGUUGCAUAUGAGCCCGACGAGGCCGGGUGUCAGAGCCUGAUUUUUCGUUUCAGGAUUUAUAAAUUAUUUAAUAAAUUAUUCUUAGAAUUUAUAUAAAAUGUUCCUUAAUUUAUAUAAAAUGUUCCUUAGUUAAAUGUGGGAAAUAAAAUUUCUUAAACAUAAAGCAUGGCUGGAUUUAAUUUGUAUAAAAUUAUCCAUGAUUAAUUAUACUAUCUGGAAUUUUCUCGGAUUUUUCAGAGCUCAAUUACUAAUUUUAAUCAUACAAAGCACAUUUCAGUAAUUAUUAACAUAAUAAAUUAGUCAUUAAAUGAUCAAGAUAUAGUUUUUCAAAAAACUUUGAUUGUCCAAUUAUUUUCAGGAUUUUUCUUGAAAUUAUUUGAGUAUUGAAAUUAUUUUUAACAAUUCAAAAGAUCAUUUCAGUGAUUAAUUUAAAUGGAAAAGUAAUUAAAAUUCCCUUUUCCUCUUUGGGCCGAAACAAGAAUAAUUUAGUUUCAGUUUUCGGCCCAUUCUUCCUCUUUGCCUACUUCCUAUCUCCCUCUUUCCCAAAGAAGUCUAUUUCCUGUCCCUCGCCUCUUUUUCUUUUAGCUCAGAAAAAAGUCUGUUUCACUCCCUGUCGCUACAGUACUCCUUCUUCAACCUCUGGACAGAGCCCGAGCUCCUGUUCCCGUGCAGCUCGACGCCGCCGUUUCCUCCGCCAAAUCCGCUGCAUCCCGUGCCCCGUUACCAAAAUUUGUUGAGGGGAAAUAUUAUCCUUAUCCUCCUCUCCCGUUUCCCGAAGGAAUCGGAUUUUAUCCUCUUGAAUUGAGUUCAAAUCGACCGGAUAAAAUCUUAUCUCUAUCCCGCCAAACCCUAGCUUUUCCCGGCGCCGCCACGAUCGUGUUGGGCUCGAUCUCUCCCUCCCGUGCAGCUCCCUCCCUCUCCUCUAUCGGCCGCCACCUCUCCCUCUCUCCGCCGUCGCCGGUAACCCUCUCCCCGCAGCCGCCUUCUCUCUCCGCUGCCGGCAGCCACUCCAGCCGCCGUGCGCGUCGCCCUGGUUGCCGUCGUCCGGCGCCGCCACUUCCUUCGGCACCGCAGCGACAAGAGCAAGCCCGGCAGCCUCCUCCGCGAAGCCGCAAGCCAUCGGAACACCCUCGUCGUCGUGAAGCCGAUCUGUUACAUCUUCAGCCGAGUCGCGUCGCCGUUGCCGUCUUCACUGGUCAUCGCUGUUUGCUCCUUCGGCAUCACAGCACCAAGACGAAGCCCGGCCACCCCUCCGUUGCCGCCGCUCGUCGCCGAAAGUCGUCGUCCCCGUGGACCCGAAGCUCGCCGCCUUUCGGAGCUCACCGCCGGUUUCUCCCGCCGCUGCUCAUCGUUGUUGUGGCGUCGCUAAGGAUCAUCUCCAUCUCCUCUUCGUGUUGGUGCCCUCGUUUGGCCCGGCCGAGUCCUCUAGCGUCGGUGAUCUUGCGAUCCUGUGCCGUGCCGGCGAUGACUGACGCCGACGUCAUAAAGUCCAUUUUGUUUCUAAAAAUAAAUCUUAAUUGCGUCAUAAAUCGGAAUAGUUUUCUGUAUUAGGUUAAAAGUAGAUUAAUCUUAGAAAAUUCAUAACUAAAUCAUAUUAACUCGGAAUUAAGUGAUUCAUGUCUCUAAAUUCAUCGAAAAUCAUGAUCUACAUGUUUGUUUACUUUUUAUGUACUGUUUAUUUGGAGUUUCUUAGUGUUUUUCUCGUUUUGCGUAAUAGCUUGUCGUUUUCGUCGUUUUGAGGUUCGCGAGUGCGCCGGAAGUAUUGCAGAAGACUAAUUGAAGACCGAUUAUUGCAAGUUGAAGAAAAAUGAUCCAGAAGGAGGAGACGUUUGGCUUAUACACUAGUUGAGCUGCCUGUGGGAGUUGAGCUGAAACCAUCGCUAGACCAUUAAUCCGC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
76.42%
ME_num:
MEP:
23.37%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.88
Avg Expression:
1.44
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | BR-IRGA_409 // spikelet // control condition (29C) for 7 hrs--/--BR-IRGA_409 // spikelet // high temperature treatment (38C) for 7 hrs | 1.92398565362641 | 0.0340810619052856 |
| 2 | 9311 // leaf // control--/--9311 // leaf // salt | 1.6612495783953 | 0.00122646413125711 |
| 3 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | 3.29714427876703 | 1.19460905749649e-06 |
| 4 | Nipponbare // panicle // AM--/--Nipponbare // panicle // PM | -2.11761052962732 | 0.0170776159662506 |
| 5 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Watered;Short_Day | 2.26631495004233 | 0.021865733012417 |
| 6 | 9L136 // leaf // control--/--9L136 // leaf // salt | 2.74417817791482 | 1.52099601120635e-11 |
| 7 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | 1.00007862080698 | 0.0471490966002369 |