Chr:
Chr6
Start:
11302306
End:
11302693
Strand:
.
Ref_name:
OSA-LNCN5754
Sequence
(OSA-LNCN5754.1):
UUUUUAUUUUAACUGCAUUUUAAGUUGAUCUUAAAAUCGGACCAUAUGAUUUACUUACUCUGAAUAGCUUAUUUUCUGGAUGUUCUUCAGGAAUUUGGAUGCAACUGCACUAGGAAUUCAUCUGGAUUUUUUUGGUUGGUUGUGAUAACUGCAGCAAAACAUCUCAAGAGGAUAAACCUUCACUGUCAUUGAAAUAAAAAAUACACUUAUUAAUUGAAUAACGUAUUUUUAAUCCAUUCUGAACAGUGCAGAACUUUCUGAAUUAUCUAUCGGUGUUUAGCGGUUGAUUGUUGUUUUAUUGAGGGGUAUUAUUAAAUAUCAAAGUAGAUAGAUGCAGAUAAAGAAUCAAGUUUUAUGACUUGGUUUUAGUUAUACAUAUUUUUCUUCA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
97.76%
ME_num:
MEP:
1.83%
HE_num:
HEP:
0.2%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.95
Avg Expression:
0.65
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // Paclobutrazol (PB) | -7.81878445222133 | 1.14207965416983e-05 |
| 2 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // gibberellic acid (GA) | -7.89432138224023 | 1.70051214102937e-05 |