OSA-LNCN5700


Function Link


Basic Info

Chr:

Chr6

Start:

9175145

End:

9176552

Strand:

.

Ref_name:

OSA-LNCN5700

Sequence
(OSA-LNCN5700.1):

UGUCUUUUAAGAUGAAAAUAUUAUUUAAAAUUUAAUGGAAAAGUAGAUACAUGCAAUAUGAUUGAAGGGAAGAGAAAAAGUAAAGUAACAGCUCAGGCAGACAAGCACCGCAUACAGUAAACAAAGGGUAGUCAGCAACACAUGCCUCAUCACGCAGCAGGCUGCAUGCAUGCGCACAGUCGUGAGGCAGUUUCGUGUCGACGUCCGACCCAUAGCAUCCUCCAAAAACUUGCAAUCCAACUCAAACCGUGGACGUAGUCGAACUAAAACUUGAGCUAAAACUGAAAAACGAACCUCUGUGGCUGUGUUCGAGCCGAGGAUGAACCGCGAGCCGAGCAUCGACGCCCAUCGACCACGCACGGUGUGCCGCUACCCGGCUGCCGCGACGUGAGCAUCUCCUCCUUCCUCCUUCCUUUCCGUGUUUUCCUCCCUCCUCUCUGUUCUUCUUUUGCUCUUGUCUUUGCCUCCGCGCGAUGCCGCCGUCGUGCGCAUCGUCGCAUCCUCCUUGCGCGGCGCCCGCGCAUCGCUCCUCCUCUAUUGCCUCCUGGCAGUGCACGGCCUAGCCGCUGCGCCGCACCGCCUCCGUCCUCUUGCGCGCGCGAUGUGUUCGGCCGUCGCCCGCGCCGCCGCGUUGCGCCAUGCCCUCCCCGCUGUCGUCUUGGCCUCGCUCCAGGACGCCGCCGAGUGGCAGCGCCAUGUGUGCGGCCCGCCAUCGACACCCCCAACCUCGCCGCCCGGCUCCUCCUCCCCGUGCCUCUGCCCUUCCUCCACUUCCACUGCCACCGCCGUCUCCGCCCGACCCAAGCCGCCAUGGCGUCGGGCCGAGCGCUGACGUGCGGUCACCUCCGCGGCCGCCGCCUUGUAGUCCCUCCUCUGCUUUCCCAUCCACCGUCACCUCUGUUCCUCCCCUCUGUGUUGCCUCCCGGCCGCCGCGCCAAGCCGUCGCGCGCCGCCCGCACCGCGGCAGCCUUUCUUCACCGCCGCCAGUCUCCUCUCCAUCCCCGCCGUCGUCCUCCUCUCCAUCGCAGCAUGCCGGCAUCCUCCUCCACACCGUAGGCCUCCUCUUCCUCACGCCGCCGCGCCAAGCCGCGCGUCGCGCGCCGGCCGCCUCGCGCAUGCCGCCCGCAUCGAGCUCCCCACCGCGUCGGAUCUCCAGCCUCCUCUCUCCUACCGCCGCCGAGCUCCUCUCCCCUUCCUCCGCCGCCAGCCUCCACGUCCAUCGCCACCGGCCACCUCCUCUGCCCGUCGCCGUGCCCCGGCUCCCCUCUGCGCCCGGCUCCUCCUCUCUGCGCUGCCUGGCCGCCGCAUCGAGCCGAGCCGCCUCUCCCCCGUGCGCACGGACGCGCUGUCGCGCCGCCGCGCCCGGCCGUCGCACGCCGACCGCCCGUCACCCUGGCCAACGCACGCG


Expression Capacity

HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.

HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.


NE_num:

1

NEP:

0.2%

LE_num:

426

LEP:

86.59%

ME_num:

57

MEP:

11.59%

HE_num:

8

HEP:

1.63%

Type:

HCR (High-Capacity ncRNA)


Tissue Specific Expression

cutoff: tau > 0.9 and Average expression in the tissue > 10


Tissue :

shoot

Tau :

0.93

Avg Expression:

1.81

Tip: OSA-LNCN5700 is not a tissue-specific expression ncRNA.

Differential Expression

cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01


Num. Condition log2(FoldChange) Padj
1Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae4.190653803805586.49853554068312e-11