Chr:
Chr6
Start:
6220964
End:
6222414
Strand:
-
Ref_name:
OSA-LNCN5645
Sequence
(OSA-LNCN5645.1):
AAGGAACAGUGGCCCAAGGAAUAAGUCCAUUUUACUUCCCUCAUCUCUUGCCUUUUGUCGAAUAACAUCCCUCAAUCACAAAACCGGGUAUAACGACUCCCUCAUUUUCGAAAACCAGUGCAAAUCAACUCCCAAGGCAGUAUUGAGUCCAGUUUUAGCUUACGUGGCAUCUAGGUGGCAUUCAAAGUAAAAAAUUAGGUGGUACCCACGUGGGGCCCACCUAUCACCCUUCCCCUCAAUCUUUCAUCUCCUCCUCUCUCACAAUCUCAUGCCUUCCAUCGGCUCGAGUAGCGGCGGCGGGUGUGGGGGAGGAGCUCGCCGGGAGGCCGCGGCCGGCCGGGGAGGAGGUCGCCGAGAGGUCGUAGCCGGGCGGACGCGGGGGAGGAGGUCGUCGGGAGGUCACAGCGGGGCGGACGCGGGGGAGGAGGUCGCCGGGAGGCCACGGCCGGCGGAGCGCGGGGGAGGAGCUCGCCGGGAGGCCACGGCCGGCCGGAGGCGGGAGAGGAGGUUGCCGAGUGGCUGCGGCCAACCGGGAGCGGGGGAGGAGGUCGCCGGGUGGUCGCAGCCGGUCGGACGCGGGGGAGAAGCUCGCCGGGUGGCCGCGGCUGGUCGGGAGUGGGGGAGGAGCUCGCCGGGAGGCCAUGGCCGGCCGAGCGCCGGAGAGGAGCUCGCCGGGUGGUCGCGCCCGGGCGGGCGCGGGUGAGGAGCUCGCCGGGAGGUCGCGGCUGGCCGGGAGUGGGGGAGGAGCUCGCCGGGUGGUCGCGGCCGGCCGGGCGUGACGGGAGGACCUCGACGGGUGGUCGCGGCCGGUUGGGAGCGAGGGAGGACCUCGUCGGGAGUAAGGGUAGAUGAGUCGUGUCUUCAAGCCUUCCGAGGCCGCCCCCGACCGACGUUCGCCGCCACCGGCCGGCCGAAUCAGCCUCUUGCACGUGCGGCGGUGAGAAAGAGAUUGAAGGGAGGAAGAAGAUAAGAAAAGGGGCUGACAAGUGGGCCCACCAAAUUUUUUAUUUUAGCAUUUGUCCUUCCAUGUGGGACCCACUUCUAUUUUGGUGAUAUGGCUGCCACAUCAGCACAUUUGGACCAAGUCAACUUGCCACAUCAGCAUAAACCGCUUACAAAACCACCCGAGGAGUCGAUUUGCACAGGUUUUCGGAGAUGAGGGAAUCGUUAUACCUGGUUUUGUGGUCGAGGAUGUUAUUUGACGAAGGGCAAGAGAUGAGGGAGGUAAAAUGGACUUAUUCCCCCAAUAAAAUAUGGAGGCCCAAAUGCCUGGCCUGGCCUGUCUAGUACUUUUCUAAGUGGACCAGAUGGAUAAACUGAUAAAGCCAUAGCCCAUAGGGUGCAUCACCAAUGCUUUUCUUUAUUUGCCCC
Sequence
(OSA-LNCN5645.2):
AAGGAACAGUGGCCCAAGGAAUAAGUCCAUUUUACUUCCCUCAUCUCUUGCCUUUUGUCGAAUAACAUCCCUCAAUCACAAAACCGGGUAUAACGACUCCCUCAUUUUCGAAAACCAGUGCAAAUCAACUCCCAAGGCAGUAUUGAGUCCAGUUUUAGCUUACGUGGCAUCUAGGUGGCAUUCAAAGUAAAAAAUUAGGUGGUACCCACGUGGGGCCCACCUAUCACCCUUCCCCUCAAUCUUUCAUCUCCUCCUCUCUCACAAUCUCAUGCCUUCCAUCGGCUCGAGUAGCGGCGGCGGGUGUGGGGGAGGAGCUCGCCGGGAGGCCGCGGCCGGCCGGGGAGGAGGUCGCCGAGAGGUCGUAGCCGGGCGGACGCGGGGGAGGAGGUCGUCGGGAGGUCACAGCGGGGCGGACGCGGGGGAGGAGGUCGCCGGGAGGCCACGGCCGGCGGAGCGCGGGGGAGGAGCUCGCCGGGAGGCCACGGCCGGCCGGAGGCGGGAGAGGAGCUCGCCGGGUGGCCGCGGCUGGUCGGGAGUGGGGGAGGAGCUCGCCGGGAGGCCAUGGCCGGCCGAGCGCCGGAGAGGAGCUCGCCGGGUGGUCGCGCCCGGGCGGGCGCGGGUGAGGAGCUCGCCGGGAGGUCGCGGCUGGCCGGGAGUGGGGGAGGAGCUCGCCGGGUGGUCGCGGCCGGCCGGGCGUGACGGGAGGACCUCGACGGGUGGUCGCGGCCGGUUGGGAGCGAGGGAGGACCUCGUCGGGAGUAAGGGUAGAUGAGUCGUGUCUUCAAGCCUUCCGAGGCCGCCCCCGACCGACGUUCGCCGCCACCGGCCGGCCGAAUCAGCCUCUUGCACGUGCGGCGGUGAGAAAGAGAUUGAAGGGAGGAAGAAGAUAAGAAAAGGGGCUGACAAGUGGGCCCACCAAAUUUUUUAUUUUAGCAUUUGUCCUUCCAUGUGGGACCCACUUCUAUUUUGGUGAUAUGGCUGCCACAUCAGCACAUUUGGACCAAGUCAACUUGCCACAUCAGCAUAAACCGCUUACAAAACCACCCGAGGAGUCGAUUUGCACAGGUUUUCGGAGAUGAGGGAAUCGUUAUACCUGGUUUUGUGGUCGAGGAUGUUAUUUGACGAAGGGCAAGAGAUGAGGGAGGUAAAAUGGACUUAUUCCCCCAAUAAAAUAUGGAGGCCCAAAUGCCUGGCCUGGC
Sequence
(OSA-LNCN5645.3):
AAGGAACAGUGGCCCAAGGAAUAAGUCCAUUUUACUUCCCUCAUCUCUUGCCUUUUGUCGAAUAACAUCCCUCAAUCACAAAACCGGGUAUAACGACUCCCUCAUUUUCGAAAACCAGUGCAAAUCAACUCCCAAGGCAGUAUUGAGUCCAGUUUUAGCUUACGUGGCAUCUAGGUGGCAUUCAAAGUAAAAAAUUAGGUGGUACCCACGUGGGGCCCACCUAUCACCCUUCCCCUCAAUCUUUCAUCUCCUCCUCUCUCACAAUCUCAUGCCUUCCAUCGGCUCGAGUAGCGGCGGCGGGUGUGGGGGAGGAGCUCGCCGGGAGGCCGCGGCCGGCCGGGGAGGAGGUCGCCGAGAGGUCGUAGCCGGGCGGACGCGGGGGAGGAGGUCGUCGGGAGGUCACAGCGGGGCGGACGCGGGGGAGGAGGUCGCCGGGAGGCCACGGCCGGCGGAGCGCGGGGGAGGAGCUCGCCGGGAGGCCACGGCCGGCCGGAGGCGGGAGAGGAGGUCGCCGAGUGGCCGCGGCCAGCCGGAAGCAGGGGAGGAGCUCGGCGAGUGGCCGCGGCUGGUCGGGAGUGGGGGAGGAGGUUGCCGAGUGGCUGCGGCCAACCGGGAGCGGGGGAGGAGGUCGCCGGGUGGUCGCGGCUGGCCGGGAGUGGGGGAGGAGCUCGCCGGGUGGUCGCGGCCGGCCGGGCGUGACGGGAGGACCUCGACGGGUGGUCGCGGCCGGUUGGGAGCGAGGGAGGACCUCGUCGGGAGUAAGGGUAGAUGAGUCGUGUCUUCAAGCCUUCCGAGGCCGCCCCCGACCGACGUUCGCCGCCACCGGCCGGCCGAAUCAGCCUCUUGCACGUGCGGCGGUGAGAAAGAGAUUGAAGGGAGGAAGAAGAUAAGAAAAGGGGCUGACAAGUGGGCCCACCAAAUUUUUUAUUUUAGCAUUUGUC
Sequence
(OSA-LNCN5645.4):
AAGGAACAGUGGCCCAAGGAAUAAGUCCAUUUUACUUCCCUCAUCUCUUGCCUUUUGUCGAAUAACAUCCCUCAAUCACAAAACCGGGUAUAACGACUCCCUCAUUUUCGAAAACCAGUGCAAAUCAACUCCCAAGGCAGUAUUGAGUCCAGUUUUAGCUUACGUGGCAUCUAGGUGGCAUUCAAAGUAAAAAAUUAGGUGGUACCCACGUGGGGCCCACCUAUCACCCUUCCCCUCAAUCUUUCAUCUCCUCCUCUCUCACAAUCUCAUGCCUUCCAUCGGCUCGAGUAGCGGCGGCGGGUGUGGGGGAGGAGCUCGCCGGGAGGCCGCGGCCGGCCGGGGAGGAGGUCGCCGAGAGGUCGUAGCCGGGCGGACGCGGGGGAGGAGGUCGCCGAGUGGCCGCGGCCAGCCGGAAGCAGGGGAGGAGCUCGGCGAGUGGCCGCGGCUGGUCGGGAGUGGGGGAGGAGGUUGCCGAGUGGCUGCGGCCAACCGGGAGCGGGGGAGGAGGUCGCCGGGUGGUCGCAGCCGGUCGGACGCGGGGGAGAAGCUCGCCGGGUGGCCGCGGCUGGUCGGGAGUGGGGGAGGAGCUCGCCGGGAGGCCAUGGCCGGCCGAGCGCCGGAGAGGAGCUCGCCGGGUGGUCGCGCCCGGGCGGGCGCGGGUGAGGAGCUCGCCGGGAGGUCGCGGCUGGCCGGGAGUGGGGGAGGAGCUCGCCGGGUGGUCGCGGCCGGCCGGGCGUGACGGGAGGACCUCGACGGGUGGUCGCGGCCGGUUGGGAGCGAGGGAGGACCUCGUCGGGAGUAAGGGUAGAUGAGUCGUGUCUUCAAGCCUUCCGAGGCCGCCCCCGACCGACGUUCGCCGCCACCGGCCGGCCGAAUCAGCCUCUUGCACGUGCGGCGG
Sequence
(OSA-LNCN5645.5):
AAGGAACAGUGGCCCAAGGAAUAAGUCCAUUUUACUUCCCUCAUCUCUUGCCUUUUGUCGAAUAACAUCCCUCAAUCACAAAACCGGGUAUAACGACUCCCUCAUUUUCGAAAACCAGUGCAAAUCAACUCCCAAGGCAGUAUUGAGUCCAGUUUUAGCUUACGUGGCAUCUAGGUGGCAUUCAAAGUAAAAAAUUAGGUGGUACCCACGUGGGGCCCACCUAUCACCCUUCCCCUCAAUCUUUCAUCUCCUCCUCUCUCACAAUCUCAUGCCUUCCAUCGGCUCGAGUAGCGGCGGCGGGUGUGGGGGAGGAGCUCGCCGGGAGGCCGCGGCCGGCCGGGGAGGAGGUCGCCGAGAGGUCGUAGCCGGGCGGACGCGGGGGAGGAGGUCGUCGGGAGGUCACAGCGGGGCGGACGCGGGGGAGGAGGUCGCCGGGAGGCCACGGCCGGCGGAGCGCGGGGGAGGAGCUCGCCGGGAGGCCACGGCCGGCCGGAGGCGGGAGAGGAGGUCGCCGAGUGGCCGCGGCCAGCCGGAAGCAGGGGAGGAGCUCGGCGAGUGGCCGCGGCUGGUCGGGAGUGGGGGAGGAGGUUGCCGAGUGGCUGCGGCCAACCGGGAGCGGGGGAGGAGGUCGCCGGGUGGUCGCAGCCGGUCGGACGCGGGGGAGAAGCUCGCCGGGUGGCCGCGGCUGGUCGGGAGUGGGGGAGGAGCUCGCCGGGAGGCCGCGGCUGGCCGGGAGUGGGGGAGGAGCUCGCCGGGUGGUCGCGGCCGGCCGGGCGUGACGGGAGGACCUCGACGGGUGGUCGCGGCCGGUUGGGAGCGAGGGAGGACCUCGUCGGGAGUAAGGGUAGAUGAGUCGUGUCUUCAAGCCUUCCGAGGCCGCCCCCGACCGACGUUCGCCGCCACCGGCCGGCCGAAUCAGC
Sequence
(OSA-LNCN5645.6):
AAGGAACAGUGGCCCAAGGAAUAAGUCCAUUUUACUUCCCUCAUCUCUUGCCUUUUGUCGAAUAACAUCCCUCAAUCACAAAACCGGGUAUAACGACUCCCUCAUUUUCGAAAACCAGUGCAAAUCAACUCCCAAGGCAGUAUUGAGUCCAGUUUUAGCUUACGUGGCAUCUAGGUGGCAUUCAAAGUAAAAAAUUAGGUGGUACCCACGUGGGGCCCACCUAUCACCCUUCCCCUCAAUCUUUCAUCUCCUCCUCUCUCACAAUCUCAUGCCUUCCAUCGGCUCGAGUAGCGGCGGCGGGUGUGGGGGAGGAGCUCGCCGGGAGGCCGCGGCCGGCCGGGGAGGAGGUCGCCGAGAGGUCGUAGCCGGGCGGACGCGGGGGAGGAGGUCGCCGGGAGGCCACGGCCGGCGGAGCGCGGGGGAGGAGCUCGCCGGGAGGCCACGGCC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
46.34%
ME_num:
MEP:
52.24%
HE_num:
HEP:
1.22%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.75
Avg Expression:
1.72
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | -2.85469858272361 | 3.60346771522493e-05 |
2 | 9L136 // leaf // control--/--9L136 // leaf // salt | 1.27406015350876 | 0.0157116439279149 |