Chr:
Chr6
Start:
2469776
End:
2470768
Strand:
-
Ref_name:
OSA-LNCN5586
Sequence
(OSA-LNCN5586.1):
UUUAAUUGUCACCGCAAGCUUCAUGCAUUUCAGCAAUUUUGAAGCCGCGGCGAUGCUGCAUGCAGUAAUUUUGGGGCGCACAGAAAUAAAUCACUGGCACGAACAAAUUAAAUGGUCAUCCCGCGCGCCGUGUGCUUGCCCGGCGCGAUCGAUGGAGAGGCGCCGUAUCAAAUUAGCAAAUUAAUUAGCAGGAGUACCGAAUUAAUUUCAACAUGGCAAAGGUUAACUAGCUGUACUGUUUACAUAAUUAAUCAUCAAGAAACUACUCCUAGCAAGCAUUGCUUUUACAUGAAGCACGGAGGGGGAGAUAAUGCCAAACAUGAGUAGCGGCCGCGUUGAGCAGUUGAGCACGCCUACGCAACUAUUUGGAUAUAUAUACAUUGGGACGUGUUGACUGAGCAGUGAGCACAAAGAGUCACGGCAACGCUUGACCUGUUGAGUACGGAUGGUCUCCCUGGCUAGAUGAUCAUCAGGGUGUUUUCCUUGUAAUUAUCUUAUGGAUAAGUACCAGAGUUGAAAACUCUUACACAAGAGUACAAGACAUGUCAUUCUUCAGAGCCUAUCCCCUCACAACGGCUGAGUAUACAACACAACUCUUAACCAUUAAUCCAUCACAAUAUUUUUUUUAUUACCCUUCUUACGAGAAAGCAAAAUUCCUUUAUGAAAGUGCGGUGGAGAGACUGAAAUGAGCUCGAGGAAAUCGAAAAGAAAACACAGGAACGAGGAAAUAGACACGACGUCAGAUUACAGUCUCCAGAGAACUCGCUUUGAUGGACGAUAGGAUAGACAUGCUGAUAUGGCCACCAUGAUCAAAUAAUGUAUCA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
96.34%
ME_num:
MEP:
3.46%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.97
Avg Expression:
0.77
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // shoot // No_DIS;Fr13_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 2.18430062613482 | 0.000758580753281682 |
| 2 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 6.5503571263454 | 3.75255779007083e-06 |
| 3 | Nipponbare // shoot // No_DIS;_mock_inoculated--/--Nipponbare // shoot // No_DIS;Fr13_inoculated | 4.15082890714895 | 0.0449222705832697 |