Chr:
Chr5
Start:
29753066
End:
29761537
Strand:
-
Ref_name:
OSA-LNCN5533
Sequence
(OSA-LNCN5533.1):
AUUUGGAGAGGUGGACCCCUAGAGAUUUUUCUAGAAAUGACUUACCAUAGGCCACGAAGCAGCGGUUGUUUCAGCGAAACGUCGAAUAACUGAGGGACCACAACUGGUUUUCAACGAGGUGGUUAGUAUAGGAAUGACACAUGGGAUGUUAGGGAGGAUAGCCUAGACGAUGUCGGUGUCAAGCGCGUCGACUAACCGCGCCGUUAAGGUAGGCUAGCGGGCGCGACGCUGUGGAAUGCUGAUGGAGAAUUCUGGGCGAAAUUAAAACCUUGAUAACUUUGCCUUCCAGUCAUGGAAUCGAGCUAGGUUUUUUGCGACGGCUGCAGAAUCUUGGACCUCACCCUAGAGAGACUGGAUUUGGAGAGGUGGACCCCAGAGAUUUUUCUAGAAAUGACUUACCAUAGGCCACGAUGCAGCGGUUGUUUCGACGAAACGUCGAAUAUCUGAGGGACCACAACUGGUUUUCAACGAGGUGGUUAGUAUAGGAAUGGCACAUGGGAUGUUAGGGUGGAUAGCUUAGACGAUGUCGGUGUCAAGCGCGUCGACUAACCGCGCCGUUAAGGUAGGCUGGCGGGCGUGACACUGUGGAAUGCAGAUGGAGAAUUCUGUGCAAAUUAAAACCUUGAUAACUUUGCCUUCCGAUCAUGGAAUCGAGCUAGGUUUUUUAUGAUGGCUGCAGAAUCACGGGCCUAACCCUAGAGAGAUUGGAUUUGGAGAGUUGGACCCCCAGAGAUUUUUCUAGAAAUUACUUACCAUAGGCCACAAAGCAGCGGUUGUUUCGGCGAAACGUCGAAUAUCUGAGGGUCCACAACUGGUUUUCAACGAGGUGGUUAGUAUAGGGAUGGCACAUAGGACGUUAGGUGGAUAGCUUAGACGAUGUCGGUGUCAAAUGAAUUGACUAACCGCGCCGUUAAGGUAGGCUGGCGGGCGCGACACUGUGAAAUGCAGAUGGAGAAUUCUGUGCGAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUGGAAUCGAGCUAGGUUUUUUUGACGGCUGCAGAAUCACGGGCCUCACAGAAAAGAGACUGGAUUUGGAGAGUUGGACCCCCAAAGAUUUUUCUAGAAAUGACUUACCAUAGGCCACGAAGCAACAGUUGGUUCGGCGAAACAUCGAAUAUCUGAGGGUGCACAACUUGUUUUCAACGAGGUGGUUAGUAUAGGAAUGGCACAUAGGACGUUAGGGUGGAUAGCUUAGACGAUGUCGGUGUCAAGCGCGUUGACUAACCGCGCCAUUAAGGUAGGCUGGCGGGCGCGACACUGUGGAAUGCAGAUGGAGAAUUAUGUGCAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUGGAAUCGAGCUAGGUUUUUUUUGACGGCUGCAGAAUAACAGGCCUCACCGAAGAGAGACUGGAAUUAGAGAGUUGGACCCCCAGAGAUUUUUCUAGAAAUUACUUACCAUAGGCCACGAAGCAGCGGUUGUUUCGGCGAAACGUCAAAUAUCUGAGGGUCCACAACUGGUUUUCAACGAGGUGGUUAGUAUAGGGAUGGCACAUAGGACGUUAGGGUGGAUAGCUUAGACGAUGGCGGUGUCUAGCGCGUCAACUAACCGCGCCGUUAAUGUAGGCUGGCGGCCGCGACACUGUGGAAUGCAGAUGGAGAAUUCUGUGCAAAUUAAAGCCUUGAUAACUUUGCUUUCUGGUCAUGGAAUCGAGCUAGGUUUUUUGUGACGGCUGCAGAUUCACGGGCCUCACCCUAGCGAGACUGGAUUUGGAGAGUUGGACCCCCAGAGAUUUUUCUAGAAAUUACUUACCAUAGGCCACGAAGCAGCGGUUGUUACGGCGAAACGUCGAAUAUCGGAGGGUCCACAACUAUUUUUCAAUGAGGUAGUUAGUAUAGGAAUGGCACAUAGGACGUUAGGCUGGACAGCCUAGACGAUGUCGGUGACAAGCGCGUCGACUAACCGGGCCGUUAAGGUAGGCUGGCCAGCGCGACACUGUGGAAGGCAGAUGGAGAAUUCUGUGCGAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUGGAAUCGAGCUAGGUUUUUUUUACGGCUGCAGAAUCACGAGCCUCACAGAUGAGAGACUGGAUUUGGAGAGUUGGACCCCCAGAGAUUUUUCUAGAAAUUACUUACCAUAGGCCACGAAGCAGCGGUUGUUUCGGCGAAACGUCGAAUAUCUGAGGGUCCACAACUGGUUUUCAACGAGGUGGUUUGUAUAGCAAUGGCACAUAGGAUGUUAGGGUGGAUAGCCUAGAUGAUGUCGGUGUCAAGCGUGUCGACUAACCACGCCGUUAAGGUAGGCUGGCGGGCGCGACACUGUGGAAUGCAGAUGGAGAAUUAUGGGCGAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUGGAAUCGAGCUAGGUUUUUUUUGACGGCUGCAGAAUCACGGGCCUCACCCUAGAGAGACUGGAUUUGGAGAGGUGGACCCCAGGGAUUUUUCUAGAAAUGACUUACCAUAGGCCACGAUGCAGCUGUUGUUUCGACGAAACGUUGAAUAUCUGAGGUCCACAACUGGUUGUCAACCAGGUGGUUAGUAUAGGAAUGGCACAUGGGAUGUUAGGGUGGAUAGCUUAGACGAUGUCGGUGUCAAGCGCGUCGAUUAACCGCGCCGUUAAGGUAGGCUGGCGGGCGUGACACUGUGGAAUGCAGAUGGAGAAUUCUCUGCAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUGGAAUCGAGCUAGGUUUUUUAUGAUGGCUGCAGAAUCACGGGCCUCACCCUAGAGAGACUGGAUUUGGAGAGUUGGACCCCCAGAGAUUUUUCUACAAAUUACUUACCAUAGGCCACAAAGCAGCGGUUGUUUCGGCGAAACGUCGAAUACCUGAGGGUCCACAACUGGUUUUCAACGAGGUGGUUAGUAUAGGGAUGGCACAUAGGACGUUACGUGGAUAGCUUAGACGAUGUCGGUGUCAAGCGCGUUGACUAACCGCGCCGUUAAGGUAGGCUGGCGGGCGCGACACUGUGAAAUGCAGAUAGAGAAUUCUGUGCGAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUGGAAUCGAGCUAGGUUUUUUUUUUAUGGCUGCAGAAUCACGGGCCUCACAGAAAAGAGACUGGAUUUGGAGAGUUGGACCCCCAGAUAUUUUUCUAGAAAUGACUUACCAUAGGCCAUGAAGCAGCGGUUGGUUCGGCGAAACAUCGAAUAUCUGAGGGUCCACAACUUGUUUUCAACGAGGUGGUUAGUAUAGGGAUGGCACAUAGGACGUUAGGGUGGAUAGCUUAAACGAUGUCGGUGUCAAGCGCGUUGACUAACCGCGCCGUUAAGGUAGGCUGGCGGGCGCGACACUGUGGAAUGCAGAUGGAGAAUUCUGUGCAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUGGAAUCGAGCUAGGUUUUUUUGGACGGCUGUAGAAUCACAGGCCUCACCCUAGAGACACUGGAUUUGGAGAGUUGGACCCCCAGAGAUUUUUCUAGAAAUUACUUACCAUAGGCCACGAAGCAGCGGUUGUUUCGGCGAAACGUCGAAUAUCUGAGGGUCCACAACUGGUUUUCAACGAGGUGGUUAGUAUAGGGAUGGCACAUAGGACGUUAGGGUGGAUAGCUUAGACGAUGUCGGUGUCUAGCGCGUCGACUAACCGCGCCGUUAAGGUAGGCUGGCGGCCGCGACACUGUGGAAUGCAGAUGGAGAAUUCUGUGCAAAUUAAAGCCUUGAUAACUUUGCUUUCUGGUCAUGGAAUCGAGCUAGGUUUUUUGUGACGGCUGCAGAAUCACAGGCCUCACCCUAGAGAGACUGGAUUUGGAGAGUUGGACCCCCAGAGAUUUUUCUAGAAAUUACUUACCAUAGGCCACAAAGCAGCGGUUGUUUCGGCGAAACGUCGAAUAUCUGAGGGUCCACAACUGGUUUUCAACGAGGUGGUUAGUAUAGGGAUGGCACAUAGGACGUUACGUGGAUAGCUUAGACGAUGUCGGUGUCAAAUGAAUCGACUAACCGCGCCGUUAAGGUAGGCUGGCGGGCGCGACACUGUGAAAUGCAGAUGGAGAAUUCUGUGCGAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUGGAAUCGAGCUAGGUUUUUUUUGAUGGCUGCAGAAUCACGGGCCUCACAGAAAAGAGACUGGAUUUGGAGAGUUGGACCCCCAGAGAUUUUUCUAGAAAUGACUUACCAUAGGCCACGAAGCAGCGGUUGGUUCGGCGAAACAUCGAAUAUCUGAGGGUCCACAACUUGUUUUCAACGAGGUGGUUAGUAUAGGGAUGGCACAUAGGACGUUAGGGUGGAUAGCUUAAACGAUGUCGGUGUCAAGCGCGUUGACUAACCGCGCCGUUAAGGUAGGCUGGCGGGCGCGACACUGUGGAAUGCAGAUGGAGAAUUCUGUGCAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUGGAAUCGAGCUAGGUUUUUUUGGACGGCUGCAGAAUCACAGGCCUCACCCUAGAGACACUGGAUUUGGAGAGUUGGACCCCCAGAGAUUUUUCUGGAAAUUACUUACCAUAGGCCACGAAGCAGCGGUUGUUUCUGCGAAACGUGGAAUAUCUAAGGGUCCACAACUGAUUUUCAAGGAGGUGGUUAGUAUAGGGAUGGCACAUAGGACGUUAGGGUUGAUAGCUUAGACGAUGUCGGUGUCAAGCGCGUCGACUAACCGCGCCGUAAAGUUAGGCUGGCGGGCGCGACACUGUGGAAUGCAGAUGGAGAAUUCUGUGCAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUAGAAUCGAGCUAGGUUUUUUUGGACGGCUGCAGAAUCACAGGCCUCACCCUAGAGACACUGGAUUUGGAGAGUUGGACCCCCAGAGAUUUUUCUAGAAAUUACUUACCAUAGGCCACGAAGCAGCGGUUGUUUCGACGAAACGUCGAAUAUCUGAGGGUCCACAACUGGUUUUCAACGAGGUGGUUAGUAUAGGGAUGGCACAUAGGACGUUAGGGUGGAUAGCUUAGACGAUGUCGGUGUCUAGCGCGUCGACUAACCGCGCCGUUAAGGUAGGCUGGCGGCCGCGACACUGUGGAAUGCAGAUGGAGAAUUCUGUGCGAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUGGAAUCGAGCUAGGUUUUUUUUACGGCUGCAGAAUCACGAGCCUCACAGAUGAGAGACUGGAUUUGGAGAGUUGGACCCCCAGAGAUUUUUCUAGAAAUUACUUACCAUAGGCCACGAAGCAGCGGUUGUUUCGGCGAAACGUCGAAUAUCUGAGGGUCCACAACUGGUUUUCAACGAGGUCGUUAGUAUAAGAAUGGCACAUGGGAUGAUAGGGUGGAUAGCCUAGACGAUAUCGGAGUCAAGCGCGUCGACUAACCGCGCCGAUAAGGUUGGCUGGCGGGCGCGACACUGUGGAACGCAGAUGGAGAAUUCUGGGCGAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUGGAAUCGAGCUAGGUUUUUUUUGACGGCUGCAGAAUCACGGGCCUCACCCUAGAGAUACUGGAUUUGGAGAGGUGGACCUCUAGAGAUUUUUCUAGAAAUGACUUACCAUAGGCCACGAAGCAGCGGUUGUUUUAGCGAAACGUCGAAUAUCGGAGGGUCCACAACUGGUUUUCAACGAGGUGGUUAGUAUAGGAAUGGCACAUAGGAUGUUAGGGUGGAUAGCCUAGACAAUGUCAGUAUCAAGCGCAUCAACUAACCGCACCGAUAAGGUAGACUGGCGGGCGCGACACAGUGGAAUGCAGAUAUGGAAUUCUGGGUGAAAUUAAAACCUAGAUAACUUUGCCUUUCGGUCAUGGAAUCGAGCUAGGUUUUUUUUUGCGGCUGCAGAAUCACGGGCCUCACCCUAGUGUGACUGGAUUUGGAGAGGUGAACCCCCAGAGAUUUUUCUAGAAAUGACUUACCAUAGGCCACGAAGCAGCGGUUGUUUCGGCGAAACGUCGAAUAUCUAAGGGUCCACAACUGGUUUUCAACGAGGUGGUUAGUAUAGGAAUGGCACAUAGGACGUUAGGGUGGAUAGCUUAGACGAUGUCGGUGUCAAGCGCGUCGACUAACCGCGUCGUUAAGGUAGGCUGGCGGGCACGACACUGUGGAAUGCAGAUGGAGAAUUCUGGGCGAAAUUAAACAACUCCGAUCCAUAAGAGACC
Sequence
(OSA-LNCN5533.2):
AUUUGGAGAGGUGGACCCCUAGAGAUUUUUCUAGAAAUGACUUACCAUAGGCCACGAAGCAGCGGUUGUUUCAGCGAAACGUCGAAUAACUGAGGGACCACAACUGGUUUUCAACGAGGUGGUUAGUAUAGGAAUGACACAUGGGAUGUUAGGGAGGAUAGCCUAGACGAUGUCGGUGUCAAGCGCGUCGACUAACCGCGCCGUUAAGGUAGGCUAGCGGGCGCGACGCUGUGGAAUGCUGAUGGAGAAUUCUGGGCGAAAUUAAAACCUUGAUAACUUUGCCUUCCAGUCAUGGAAUCGAGCUAGGUUUUUUGCGACGGCUGCAGAAUCUUGGACCUCACCCUAGAGAGACUGGAUUUGGAGAGGUGGACCCCAGAGAUUUUUCUAGAAAUGACUUACCAUAGGCCACGAUGCAGCGGUUGUUUCGACGAAACGUCGAAUAUCUGAGGGACCACAACUGGUUUUCAACGAGGUGGUUAGUAUAGGAAUGGCACAUGGGAUGUUAGGGUGGAUAGCUUAGACGAUGUCGGUGUCAAGCGCGUCGACUAACCGCGCCGUUAAGGUAGGCUGGCGGGCGUGACACUGUGGAAUGCAGAUGGAGAAUUCUGUGCAAAUUAAAACCUUGAUAACUUUGCCUUCCGAUCAUGGAAUCGAGCUAGGUUUUUUAUGAUGGCUGCAGAAUCACGGGCCUAACCCUAGAGAGAUUGGAUUUGGAGAGUUGGACCCCCAGAGAUUUUUCUAGAAAUUACUUACCAUAGGCCACAAAGCAGCGGUUGUUUCGGCGAAACGUCGAAUAUCUGAGGGUCCACAACUGGUUUUCAACGAGGUGGUUAGUAUAGGGAUGGCACAUAGGACGUUAGGUGGAUAGCUUAGACGAUGUCGGUGUCAAAUGAAUUGACUAACCGCGCCGUUAAGGUAGGCUGGCGGGCGCGACACUGUGAAAUGCAGAUGGAGAAUUCUGUGCGAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUGGAAUCGAGCUAGGUUUUUUUGACGGCUGCAGAAUCACGGGCCUCACAGAAAAGAGACUGGAUUUGGAGAGUUGGACCCCCAAAGAUUUUUCUAGAAAUGACUUACCAUAGGCCACGAAGCAACAGUUGGUUCGGCGAAACAUCGAAUAUCUGAGGGUGCACAACUUGUUUUCAACGAGGUGGUUAGUAUAGGAAUGGCACAUAGGACGUUAGGGUGGAUAGCUUAGACGAUGUCGGUGUCAAGCGCGUUGACUAACCGCGCCAUUAAGGUAGGCUGGCGGGCGCGACACUGUGGAAUGCAGAUGGAGAAUUAUGUGCAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUGGAAUCGAGCUAGGUUUUUUUUGACGGCUGCAGAAUAACAGGCCUCACCGAAGAGAGACUGGAAUUAGAGAGUUGGACCCCCAGAGAUUUUUCUAGAAAUUACUUACCAUAGGCCACGAAGCAGCGGUUGUUUCGGCGAAACGUCAAAUAUCUGAGGGUCCACAACUGGUUUUCAACGAGGUGGUUAGUAUAGGGAUGGCACAUAGGACGUUAGGGUGGAUAGCUUAGACGAUGGCGGUGUCUAGCGCGUCAACUAACCGCGCCGUUAAUGUAGGCUGGCGGCCGCGACACUGUGGAAUGCAGAUGGAGAAUUCUGUGCAAAUUAAAGCCUUGAUAACUUUGCUUUCUGGUCAUGGAAUCGAGCUAGGUUUUUUGUGACGGCUGCAGAUUCACGGGCCUCACCCUAGCGAGACUGGAUUUGGAGAGUUGGACCCCCAGAGAUUUUUCUAGAAAUUACUUACCAUAGGCCACGAAGCAGCGGUUGUUACGGCGAAACGUCGAAUAUCGGAGGGUCCACAACUAUUUUUCAAUGAGGUAGUUAGUAUAGGAAUGGCACAUAGGACGUUAGGCUGGACAGCCUAGACGAUGUCGGUGACAAGCGCGUCGACUAACCGGGCCGUUAAGUUAGGCUGGCGGGCGCGACACUGUGGAAUGCAGAUGGAGAAUUCUGUGCAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUAGAAUCGAGCUAGGUUUUUUUGGACGGCUGCAGAAUCACAGGCCUCACCCUAGAGACACUGGAUUUGGAGAGUUGGACCCCCAGAGAUUUUUCUAGAAAUUACUUACCAUAGGCCACGAAGCAGCGGUUGUUUCGACGAAACGUCGAAUAUCUGAGGGUCCACAACUGGUUUUCAACGAGGUGGUUAGUAUAGGGAUGGCACAUAGGACGUUAGGGUGGAUAGCUUAGACGAUGUCGGUGUCUAGCGCGUCGACUAACCGCGCCGUUAAGGUAGGCUGGCGGCCGCGACACUGUGGAAUGCAGAUGGAGAAUUCUGUGCGAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUGGAAUCGAGCUAGGUUUUUUUUACGGCUGCAGAAUCACGAGCCUCACAGAUGAGAGACUGGAUUUGGAGAGUUGGACCCCCAGAGAUUUUUCUAGAAAUUACUUACCAUAGGCCACGAAGCAGCGGUUGUUUCGGCGAAACGUCGAAUAUCUGAGGGUCCACAACUGGUUUUCAACGAGGUCGUUAGUAUAAGAAUGGCACAUGGGAUGAUAGGGUGGAUAGCCUAGACGAUAUCGGAGUCAAGCGCGUCGACUAACCGCGCCGAUAAGGUUGGCUGGCGGGCGCGACACUGUGGAACGCAGAUGGAGAAUUCUGGGCGAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUGGAAUCGAGCUAGGUUUUUUUUGACGGCUGCAGAAUCACGGGCCUCACCCUAGAGAUACUGGAUUUGGAGAGGUGGACCUCUAGAGAUUUUUCUAGAAAUGACUUACCAUAGGCCACGAAGCAGCGGUUGUUUUAGCGAAACGUCGAAUAUCGGAGGGUCCACAACUGGUUUUCAACGAGGUGGUUAGUAUAGGAAUGGCACAUAGGAUGUUAGGGUGGAUAGCCUAGACAAUGUCAGUAUCAAGCGCAUCAACUAACCGCACCGAUAAGGUAGACUGGCGGGCGCGACACAGUGGAAUGCAGAUAUGGAAUUCUGGGUGAAAUUAAAACCUAGAUAACUUUGCCUUUCGGUCAUGGAAUCGAGCUAGGUUUUUUUUUGCGGCUGCAGAAUCACGGGCCUCACCCUAGUGUGACUGGAUUUGGAGAGGUGAACCCCCAGAGAUUUUUCUAGAAAUGACUUACCAUAGGCCACGAAGCAGCGGUUGUUUCGGCGAAACGUCGAAUAUCUAAGGGUCCACAACUGGUUUUCAACGAGGUGGUUAGUAUAGGAAUGGCACAUAGGACGUUAGGGUGGAUAGCUUAGACGAUGUCGGUGUCAAGCGCGUCGACUAACCGCGUCGUUAAGGUAGGCUGGCGGGCACGACACUGUGGAAUGCAGAUGGAGAAUUCUGGGCGAAAU
Sequence
(OSA-LNCN5533.3):
GUAGGCUGGCCAGCGCGACACUGUGGAAGGCAGAUGGAGAAUUCUGUGCGAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUGGAAUCGAGCUAGGUUUUUUUUACGGCUGCAGAAUCACGAGCCUCACAGAUGAGAGACUGGAUUUGGAGAGUUGGACCCCCAGAGAUUUUUCUAGAAAUUACUUACCAUAGGCCACGAAGCAGCGGUUGUUUCGGCGAAACGUCGAAUAUCUGAGGGUCCACAACUGGUUUUCAACGAGGUGGUUUGUAUAGCAAUGGCACAUAGGAUGUUAGGGUGGAUAGCCUAGAUGAUGUCGGUGUCAAGCGUGUCGACUAACCACGCCGUUAAGUUAGGCUGGCGGGCGCGACACUGUGGAAUGCAGAUGGAGAAUUCUGUGCAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUAGAAUCGAGCUAGGUUUUUUUGGACGGCUGCAGAAUCACAGGCCUCACCCUAGAGACACUGGAUUUGGAGAGUUGGACCCCCAGAGAUUUUUCUAGAAAUUACUUACCAUAGGCCACGAAGCAGCGGUUGUUUCGACGAAACGUCGAAUAUCUGAGGGUCCACAACUGGUUUUCAACGAGGUGGUUAGUAUAGGGAUGGCACAUAGGACGUUAGGGUGGAUAGCUUAGACGAUGUCGGUGUCUAGCGCGUCGACUAACCGCGCCGUUAAGGUAGGCUGGCGGCCGCGACACUGUGGAAUGCAGAUGGAGAAUUCUGUGCGAAAUUAAAACCUUGAUAACUUUGCCUUCCGGUCAUGGAAUCGAGCUAGGUUUUUUUUACGGCUGCAGAAUCACGAGCCUCACAGAUGAGAGACUGGAUUUGGAGAGUUGGACCCCCAGAGAUUUUUCUAGAAAUUACUUACCAUAGGCCACGAAGCAGCGGUUGUUUCGGCGAAACGUCGAAUAUCUGAGGGUCCACAACUGGUUUUCAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
0
LEP:
0.0%
ME_num:
MEP:
0.41%
HE_num:
HEP:
99.39%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
root_meristematic_zone
Tau :
0.73
Avg Expression:
251.83
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN | -1.182219428234 | 5.4272767207489e-09 |
2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hN | -1.21228655985138 | 4.82589787102727e-11 |
3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | -1.3153201881629 | 9.60314319621855e-13 |
4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA | -1.72016588131817 | 1.83617378297271e-11 |
5 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN | -1.35402727678212 | 7.31813941767483e-11 |
6 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN1dA | -2.12956407277857 | 5.36490756948887e-21 |
7 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | -1.55685626724839 | 3.21720724800253e-18 |
8 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dA | -2.22126794948124 | 5.82687647346239e-28 |
9 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | -1.39239876838723 | 1.65222338033536e-17 |
10 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hA | -1.43065110559134 | 6.45548179180048e-11 |
11 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | -1.77133451262115 | 4.894626443244e-25 |