Chr:
Chr5
Start:
17935705
End:
17936502
Strand:
-
Ref_name:
OSA-LNCN5272
Sequence
(OSA-LNCN5272.1):
ACAUGUGAUUAACAAAUAUAUACAACAAAUAAGAGAUGACAAUAACAUGUUAAUGGUAAACUUUUUUAAUUAAAAUCCUGUUGCAGCGCAUGGGCAAUAUGCUAGUAUGUCAAAUUACCAGAAGUGUAAAAUGUGUAGCAUCUCCCGGCACUCCUAAAUAGCUGCAUGUUCUAAUUAAUUAGUUUAGAAGCUCCUGCCAAAGUACACCCACAUGACUAUCCCACGAACAUCAUCUACUGUCGGAUCCAGAAAAGCCUUAAUAAAUAUUAUUAUAUAAAAGUUUGCUAUAAAAUUUUUGUUUUCAAUUCAUAAAAAAUCAAAUUCUAUUGCGCAUCCGCCUGAUGAGCCCAGGGUGGUAUGACUGUAGAUUCGCCACUUACACCAUCAACUGGUUGGUUUCCCCCCCUGUUCAUCUCCUUCAGAACUUCAGAAAUAGAAAUUGAGAAUAUUUGCCGGAACAUGAUUAUCCGCCCUUUUGGUAAGGGCGGGACGUUUCUAUAUGUUUGGAAUACUAAGGAGGAACUUAGCAUCUAGUAUUGAUAGAGAAGAAAAUGGUGAGAAAACCUGCGCUCAAACAGAUUCGAACUCAGGCCAGCACGCUGCUCCUAGUAGCUCCCUGCCAGCUGAGCUAGGUGUUGUUCUCGUUUCUAUAUCGAUCCUAGAAGUUCAGGAAUGACAGCAAGGUGAAAAUUUUCAAAAAUUUCUCAUUCCUUUAAUUUAGCAAAAAAUAUUUUAUUUCGUUCAAAAUUU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
91.06%
ME_num:
MEP:
8.74%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
embryo
Tau :
0.91
Avg Expression:
0.63
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN | -4.35556576968104 | 3.14520886267386e-06 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hN | -3.88460901508199 | 1.28175347560281e-06 |
| 3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | -5.61313466472423 | 1.61154235379294e-06 |
| 4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA | -4.09798307689757 | 0.000173178588139957 |
| 5 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN | -5.76353319580402 | 2.2873017015094e-05 |
| 6 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN1dA | -5.03298225438987 | 3.21252127977578e-05 |
| 7 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 1hA | -1.25887112833862 | 0.0342710942133542 |
| 8 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 3hN | -1.48771114140784 | 0.0142237966441894 |
| 9 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | -3.54720646080304 | 3.61958484725487e-07 |
| 10 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 3hA | -2.62437231179309 | 0.000128018809699462 |
| 11 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dA | -4.49389171068152 | 5.81945703367005e-07 |
| 12 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | -4.0979229334145 | 2.27478493517702e-08 |
| 13 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hA | -3.52833804922466 | 4.58048792734991e-06 |
| 14 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | -4.06797373035594 | 5.80458134376317e-09 |