Chr:
Chr5
Start:
16659346
End:
16659813
Strand:
+
Ref_name:
OSA-LNCN5245
Sequence
(OSA-LNCN5245.1):
AGCGAGCGGGCGGGCGAGGCGGCGGCGGCGGCCACGGGCGCGCGGGGAGGCGGCGGCGUUGGCCGCGGGCGCGCGGGGAGGCGGCGGCGUUGGCCGCGGGCGAGGCGGCGGCAGCGGCAGCGGGCGGAGGAGGAGGCGGCGGUGGCCGCGGGCGGAGGAGGCGGCGGUGGCGAGCGCGGGCGAGACAGAGGCGGCCACGGCCGCGGGCGAGGCGGAAGCAGCGGCAGCGGCGGCCGCGGGCGCGGGCGCGGGGGAGGCGGCGGCGGCGGCCGCGGACAAGGCAGAGGCGGCGGCAGCGGGCGAAGGAGGCGGCAGCCACGGGCGCGGGUGAGGCGGAGGCGGCGGCGGCGGCUGCGGGCAAGGCGGAGGCAGCGGUAGCGGCGGCCGCGGGCGCACGCGGAAGCAGCAGCCGCGGGCGCGGGCGCGGGGGAG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
79.88%
ME_num:
MEP:
13.82%
HE_num:
HEP:
6.1%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf
Tau :
0.87
Avg Expression:
4.74
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // shoot // No_DIS;Fr13_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | -2.27589933199319 | 0.0190911571486957 |
| 2 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | 2.33282719200377 | 1.96117119877409e-66 |