Chr:
Chr5
Start:
10503118
End:
10503764
Strand:
.
Ref_name:
OSA-LNCN5128
Sequence
(OSA-LNCN5128.1):
GUUAAAUGUACUUUUGGAUGAAAUAUGGUUUUAGCCGAUUAAAAUUUAAUUUGAUUUCUUUUAGUUGUCUGCUUCGACCGAUUAAUUUGAGAUAUCAACUUGAGUGUUAACACGUUACCAAAUUACGGAGGAUAAGUUUGUGCUCAUCACUGUCCACAUAAAUUUUUCUAUGAUUUUAUCUUGCACAAAAUAUUUUAGAGAAUUAGGAUGACCUUUGUUUGUAUAAGUGUUCCCACUUCAUAAUUGCAUCUAAUAUUAUUAUAGGGAUUACAUUAAAUUUCUUUUAGACUGAGAAGAUGAUAUUUGAGUUUAAUAUUAAGUCCACAUGUUAUCACCCAAGAUUAACUAUAGGUUUGUUUAGUGAAAUAAUUCUUUUAGAUUAUGCUCAUGGGACCUAUUAUGGAAUGCAAGACCAAAACUCCAAAUGCACAAAGAACUCGAGCCUAGGCAUGCAAUAUGUACAUGUAUGCUUGAUGACAUUUCUAGUCUAAUGUUGGGAAUGAAAAGGUUUUAUUUUGUUCUCAAAUUUUAAUCAUGCAAUGGUUUAAGUUGAUCAUCACCUAAAUUAAAACGGAAAUUUUUGGCUCUCAAAAUUGGAGAAAUUAACCUCUAACUAUUUUGACAAGAAAUUUUAAGUCCUAAAAUUU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
92.48%
ME_num:
MEP:
6.91%
HE_num:
HEP:
0.41%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
carpel
Tau :
0.95
Avg Expression:
1.34
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | 9L136 // leaf // control--/--9L136 // leaf // salt | 1.70286334990915 | 0.0116489779207057 |