Chr:
Chr5
Start:
7130762
End:
7131650
Strand:
.
Ref_name:
OSA-LNCN5061
Sequence
(OSA-LNCN5061.1):
AAAAAAGAUGUAGUCAGUCCAAGUCAAUCUCGGAUGCACUCCUCGCACAAAGUUGAUUUUUCGGACAAGUUUGAUACAUCGAUUCGGAUUUAGGAGCACGUCACGUAGCGAGAAAAUUUCGAUCGAAAUAAUAAUCCCUAAAACUUUCAUAGAAAAACAAAAGAUUAUUUUGUGCUUCAACUCAGGCAUAUAAUCGCUUUGUGCUUGUCUGCUUAGCCACCUGUAUUUAGUCAGAUUGGCAGCAGCUUAAUCCGUCGGCUAAAUUAGUACCAGCGAAACUUGCUGGUCAUAUUGUUGACGGCCUGAAUCUGCAGCUCCAGGUCACGGAUCUGCCUGCGCUUCGCCGCCGCGAGCACGAGCUCCUCGGCGCGCGCGUCCUUCUCCUCCUCCGCCGCGAGCAGCCGCGCCUCGGCGUCGUCGGCCCGGGCCUCGGCAUCCCGCCUCCGCGCCUCCACCGCCGCCCGCUCCGCCACGGCCACGGCCAGCGCGCGCUCCAGGGUGCCCACCUCCUCCUCCAGGUUCGCCGCCGCCUCCCCCACCAGCAGCCUCCGCCGCAGCAGCGCCGCCGUGCCCUCCUCGCCGGCGUCGUCCUCCGCCGCCGCCGCCGCCGACGCCGCGCCGCCCCUGAGCGAGGCCAGCACCGACGAGAAGCAUGACAGCGGCAUGUUUUUGAGUCGCGUUGAGAAAACGAAAAUCCAAAGACGGCGGCACGUAGAGAAAUUAAUUACGUUGGGAAAAAGUGAUGAGCCCAUGGGCUUUUGAUAGGCCGAUUAUUACGAAGGAAUACGAGUCCGAUUACGAUGGGAAGUAAGACGAGGUGUCCCGGUCUGAAUCGAAUUACACCGGUCUGAAUCGAAUACGUUGUUUAUACGCCCGAACAAAGUGAGCG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
65.04%
ME_num:
MEP:
34.76%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.88
Avg Expression:
1.89
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | -1.12155776118086 | 0.0108671519210793 |
| 2 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | -3.87664080743547 | 0.000219063287450996 |
| 3 | Nipponbare // panicle // AM--/--Nipponbare // panicle // PM | -3.54307299041682 | 0.000156453787148957 |
| 4 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | -2.77417983578186 | 0.000859107992119158 |