Chr:
Chr5
Start:
2461796
End:
2462560
Strand:
-
Ref_name:
OSA-LNCN4959
Sequence
(OSA-LNCN4959.1):
CAUUAUCCGUCUUGGAGAGAACCUGAUGCUCUUGCAUUUGCAGCUAACAAAGAUCGAUACCUCUGAGUUGAUUGGGCUAGCUCUGUAGCAACAAAAAUCAGCUGCGUGAGCAGCAACGUCAGAGAAAAAUUAUAGCGAUUGCGAUCGCCAUGAGCGACGAUAUAUAUUUCGAGUCAUCGUUCAGAACUUAUUCCUGAACUUUAACGUUGUAUCAACACUAGAAAUCACGCUGUAUUCGGAAUUCAGGAUGCAUAUUCCAACAAGAUUUGCAUUCAGUGAUUCGAUCGAUAGCUUAACGCGGUUAACCUGAGAUUGAUAGACACGAAGUUCACUUACUGAAAAAGAGCAACUUUGAUCAGGUGCUUCUUCAGAGAAACUUAAACUUUGAUCAGGUGCUUCUUCAGAGAAACUUACACGCAGUUUCUCGGUGAGAUGAUUACGAUGUUUCUCCACUAGCAGGCAAUCAGGCACCCAUGUUUUCCAAAGCAAGAAUCCGUCGAGCACUUUCGAUUAAGCAAUUUACAUGGGAAUCUAGGGAUUUCAGCAAAAACUCUUUUGGACUUUUGAAGCAGCUAGCUAGCUUCUUCCUGCUGCCUUUGUUGAUUGUUGCAGCCAACUAGCUAG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
97.15%
ME_num:
MEP:
2.64%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.92
Avg Expression:
0.08
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_CFBP7341 | 4.99230352455732 | 0.00737345160806727 |
2 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_CFBP7331 | 4.99634177777413 | 0.0123557337983271 |