Chr:
Chr4
Start:
35270488
End:
35270847
Strand:
-
Ref_name:
OSA-LNCN4897
Sequence
(OSA-LNCN4897.1):
AUUGAAGGCAUGUGCCACGCUGAGGAUUGACCAAAGCUAAACAAGACGGGCCGGUAUUUGGGCCAUGGCAAACAGUAGAGGCGAGAAAGUGGAGUCCAGCAGAGACAGCGGGUGGGGGCAGCAGGCAGGCAGCCAUUCUGGCACACCACCCCCCACUCAGCGCAGUCCAGUAUCACAUGCAUUGCAUUGCAGCCACCUAAUUUAGCUGCCAGUGCCACUAACAAUCUCUCGCUCGCUGCCUUGGCUUGAUUAAUUAAGACCGCUGUAAUAAUGUACAC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
98.37%
ME_num:
MEP:
1.02%
HE_num:
HEP:
0.41%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.99
Avg Expression:
0.72
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // Paclobutrazol (PB) | -6.62358951222272 | 0.0408971659309432 |
| 2 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // gibberellic acid (GA) | -6.69992625670572 | 0.0412286994046217 |