Chr:
Chr4
Start:
34564247
End:
34566288
Strand:
-
Ref_name:
OSA-LNCN4881
Sequence
(OSA-LNCN4881.1):
UUUUGCAAAAUUGUUUGGCCCAUCCCGCAUAGCCCGUUGGGCGCCACCACAUUAGGGCACGAGACUGGGUCUCUGGGAGACGCGAGACACCGCCGCAGCCGAGACGGGAGACGGCGGCGGUGCUACUCUCGUCUUCCUCGUCGCCCAUCCAUCUUCCUCGGCGAGACGACGCCGCAGCAGCCAUCCCCAACCCCCACGUGUGUUCGGUGCGAGCCUGCUACGCUACCCGUGCUGCUGCCUCCAACUCUCUACCCAUCACUGGCUCCAUCGGCCUGGGAGACUGGGAGCAGGUAACUUCGAGCUGCCAUGGAAGAGGGCUGCAGUUCCAAUUGGCCGGCCACACCUUGUGCCGCAGCGACGACGGCCGGUCAAUUGUUUUUCCUCCUUCAAGAUUUGUUUGUUCUUCAAGCAGCAGGGGAUUUGUUUCUUCAAGAUUUGUUUGUUCUUCAAGGAGCAGGGGAUUUGUUUGAUGAGAAGUGAUUUCUACUCGUUUGGAUUAUUGAAUAAGAACUUCAGAUUAAAUAAUAAGCAUUUGGGUGAGAUUUGGUUUUGGAUCAAGUCGCUAAGAAUGGUUAGCAGGCCAGGACUGGCUUGGACUAUACUUGUUAUGUCAUUGAAAAAUGAAGUGUUGAACACAUGUUAACAUCCUUAUGUACCAGUUUGAUGUAGACCAUGUGCACCGGGCUUCAUCCGAGCUGUCGAUGGUCGCCUGGUCCUUUACGUUGCCCCAUCACGCCGGCCAAUGCUUGGUGGCUCAAGGUGAGGCAUGGACUAUGAGCAGCAAUACCGUCAUUGAUUUGUCCCGCGGUCCCGCCAAUAACUUGUUGCACCUCCUUGAUUUCUCUGCUCUAGCAACUUGUGCGACUUUUAUUUUUCUUCUUUUUUUUCUAGGAUUAUCGGCUGGUUUAGUUCUAAUGCAUGCAAGACUAUGAUUGCUCGAUUGUUUUUUCAAUCGAUCUUUGAUGUUAUGAUUUGUACUCCUUACGCGAUUAGGAUUUUGUAUGGAUCUCUCUCUCUCUUUUGCUUUGGUUGUUGUACGCGAUUACGCACGUGCGGAGACGGAGGGCGUCGCUCGGUCGGACUCACGGACGAAAAAAUUAUGAUGAU
Sequence
(OSA-LNCN4881.2):
CACCGCCGCAGCCGAGACGGGAGACGGCGGCGGUGCUACUCUCGUCUUCCUCGUCGCCCAUCCAUCUUCCUCGGCGAGACGACGCCGCAGCAGCCAUCCCCAACCCCCACGUGUGUUCGGUGCGAGCCUGCUACGCUACCCGUGCUGCUGCCUCCAACUCUCUACCCAUCACUGGCUCCAUCGGCCUGGGAGACUGGGAGCAGUUUGAUGUAGACCAUGUGCACCGGGCUUCAUCCGAGCUGUCGAUGGUCGCCUGGUCCUUUACGUUGCCCCAUCACGCCGGCCAAUGCUUGGUGGCUCAAGGUGAGGCAUGGACUAUGAGCAGCAAUACCGUCAUUGAUUUGUCCCGCGGUCCCGCCAAUAACUUGUUGCACCUCCUUGAUUUCUCUGCUCUAGCAACUUGUGCGACUUUUAUUUUUCUUCUUUUUUUUCUAGGAUUAUCGGCUGGUUUAGUUCUAAUGCAUGCAAGACUAUGAUUGCUCGAUUGUUUUUUCAAUCGAUCUUUGAUGUUAUGAUUUGUACUCCUUACGCGAUUAGGAUUUUGUAUGGAUCUCUCUCUCUCUUUUGCUUUGGUUGUUGUACGCGAUUACGCACGUGCGGAGACGGAGGGCGUCGCUCGGUCGGACUCACGGACGAAAAAAUUAUGAUGAU
Sequence
(OSA-LNCN4881.3):
CCCAUCCAUCUUCCUCGGCGAGACGACGCCGCAGCAGCCAUCCCCAACCCCCACGUGUGUUCGGUGCGAGCCUGCUACGCUACCCGUGCUGCUGCCUCCAACUCUCUACCCAUCACUGGCUCCAUCGGCCUGGGAGACUGGGAGCAGGUAACUUCGAGCUGCCAUGGAAGAGGGCUGCAGUUCCAAUUGGCCGGCCACACCUUGUGCCGCAGCGACGACGGCCGGUCAAUUGUUUUUCCUCCUUCAAGAUUUGUUUGUUCUUCAAGCAGCAGGGGAUUUGUUUCUUCAAGAUUUGUUUGUUCUUCAAGGAGCAGGGGAUUUGUUUGAUGAGAAGUGAUUUCUACUCGUUUGGAUUAUUGAAUAAGAACUUCAGAUUAAAUAAUAAGCAUUUGGUUUGAUGUAGACCAUGUGCACCGGGCUUCAUCCGAGCUGUCGAUGGUCGCCUGGUCCUUUACGUUGCCCCAUCACGCCGGCCAAUGCUUGGUGGCUCAAGGUGAGGCAUGGACUAUGAGCAGCAAUACCGUCAUUGAUUUGUCCCGCGGUCCCGCCAAUAACUUGUUGCACCUCCUUGAUUUCUCUGCUCUAGCAACUUGUGCGACUUUUAUUUUUCUUCUUUUUUUUCUAGGAUUAUCGGCUGGUUUAGUUCUAAUGCAUGCAAGACUAUGAUUGCUCGAUUGUUUUUUCAAUCGAUCUUUGAUGUUAUGAUUUGUACUCCUUACGCGAUUAGGAUUUUGUAUGGAUCUCUCUCUCUCUUUUGCUUUGGUUGUUGUACGCGAUUACGCACGUGCGGAGACGGAGGGCGUCGCUCGGUCGGACUCACGGACGAAAAAAUUAUGAUGAU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
30.89%
ME_num:
MEP:
56.1%
HE_num:
HEP:
12.8%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot_apical_meristem
Tau :
0.89
Avg Expression:
17.33
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
Tip: OSA-LNCN4881 is not a differential expression ncRNA. |