Chr:
Chr4
Start:
34106794
End:
34108944
Strand:
-
Ref_name:
OSA-LNCN4866
Sequence
(OSA-LNCN4866.1):
AGCCGUCUGAAAAGCAUACCAUUUUAAUCCAAAAGUUUAUCCUGAGAAUUUAGACUAUUUACCAUUCAAUUCGCGCGCCCUAACUUUUUUACCACCAAAUUCGCAUGCCCUUUAUAAUAUGUCAUUGGGAGUGCUAAUUAGUUUAUUUGGUACCACUUUCUCUAUUUUUACCGUGUUUCUCAUUUCUUAAUUCCAUUUGUAUUUUUUUUCAAGAUUUGUGGACGUUUUUGCCCCUGGGCCCACCUGUCAGAACCAAAGAGAGAGAUUUCUCUCUGGAUCGAAAUCGAUCGAUGCCUCCAGGCAACGCCCGAGACCGGCAUCGGCACCGUCGACCCUAAGCUCCGCCGGUGAGCGCUGCCGCCCCGCCGCCGGACGCGACCCACCCCGCCGACGGGCACCAAAUUCUCGUCGGGGACCGGGAUCAUGGCGGGAGGUGGAGGCGGAGAAGGUGGUGGCGGAGCUGCGGGAGAGGUGCGCAACGCCGACGUCGCUGCUGCUCUCUGCAUCGACAAGCUCCCCACUGGUGGCACCGUUCGCGGAAGCCUCGACAGUCACCGGUGGCUCCAGGGUAUUGUUGGCCUCCGACGCGCCCGCUGAGAGCCCGGCUGGGCCUGCGGCGGCCCCAGGCCCAGCGGAAGAGUCCAGCAGUGAAUCUGCUCCAUCUCCGAGCGCCGCUGAUGCCUGAUCGAGUAAUAAUGAAGUCCAAGUGAAUAAUUCUUCAUCCCAAGAACAUUGAUCAAGCAUAUAUGUCCU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
64.23%
ME_num:
MEP:
25.2%
HE_num:
HEP:
10.37%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.98
Avg Expression:
1457.43
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | 2.29209454969245 | 0.0228074175907022 |
2 | BR-IRGA_409 // spikelet // control condition (29C) for 7 hrs--/--BR-IRGA_409 // spikelet // high temperature treatment (38C) for 7 hrs | 2.48086463940493 | 1.69399216758904e-14 |