Chr:
Chr4
Start:
29377856
End:
29379144
Strand:
.
Ref_name:
OSA-LNCN4782
Sequence
(OSA-LNCN4782.1):
CGUGCAGUAACAACAUUCAAAUUUAGUUGAAAUAUAGUCAUGAUGGAUUUACUUUUGAUAAGCACUUUUUUUCUAACAUCAUGGUGCAAACGGUUUAAAAAAAUCAUACAUCACAUAAGAGAUAUUGUUAUUCGAAGCUUGGGUUUUUGGAUUUUGACUCUCCACAAGUAGUAAUACUAUAGCAUUACUACUCGUUACUAAUAUGUGUUGUGCGUUACUACAAUCCCAUCGCGACGUUAAUGUAAGUGUGCGCAGUAAAGACCAUAAGUUUGUAGUAACAAUGUGUCUUAUUGCAAUUCUUGAAUAGUGUUACUGCAUAAACAUAUGUAGUAACACUUCCACUUUGUGCGGUAACAAGUAUAUUUAGCAUGUGAGACUUUUAAUCCAUAUUUUUUUUGAUUUCUGGUUUACUACAAUUUCACCACGAUGUUACUGCCAAAUAUGCAGUAACGUUCUGUAUGUUCUACAGUAACAAAGUGUUUUACUGCAGUUCUUGGAUAGUGUUACUGCAUAAACAUACAUUAAUGUGUAACUGUUAGGUGGUAACGUGUAUAUGCCGUGCAGUAACACUUUUACUUUUGUGCAGUAACGAGUAUAUAGUUAGCAUAUGAGACUCUGAACCCAUAUAUUUUUUGUUUCAAUUCUUGGUUUACUGUCAAAAGUGUAGUAACGUCAUAUACAUGCAUGCAGUAACACUAUAUUAGAGGGAGAAGACCGGUUUUCUUAAGAAGAGGGAGGAAGAACGGUUUCUCGAUGAGGGGAGUAUGUAGAUGCAUUUUGAAGUUCUAUCCUCCACAUGCAGUAACACUAUAACAUCAUUGUGAAAAUGAUUUUAAAAAUAAUACAUAUCUUGUGAGAUAUUGCUUUUCAAAUAUUUGCAUUUUGAACUUUAGCACUCCAUAUGCAGUAACAGAAUAUGUAAUUUGCAGUAACAUGGGUAUAUACAUGCAGUAACUUGGUUUUAUCAAAAGUAUAAAAUUGUUCAAAACACUCGUACAUCAAUCAGAUCUCACUCAAAGCCAUCUACAGACUUUACCUAUAGCCCACCUAUUCGAUCUUCAUCUCGUAAAACUGACAUAGUAAAACUACGAUUAUCGUGCAGUAACAUAACUACUUGGAAGUGGUAACAUGCACCUAUUAUGUAGUAACACUUCUACUUUUGUGCAGUAACAAGUAUAUGGUUAGCAUGUGAAGCUUUAACCCAUAUAUUUUUGUUUCGAUUCCUGGUCUACUAUAAUUUUACUACGUCGUUACUGCCAAAAGUGCAGUAACGUCCUAUGUGUUCUACA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
90.65%
ME_num:
MEP:
9.15%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
flag_leaf
Tau :
0.92
Avg Expression:
1.19
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA | 6.22291636445659 | 2.4765186030801e-05 |
2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN1dA | 4.14319924905009 | 0.0331624436856379 |