Chr:
Chr4
Start:
26023233
End:
26025391
Strand:
+
Ref_name:
OSA-LNCN4729
Sequence
(OSA-LNCN4729.1):
ACGGAAUGCUUAAAAACAACAAACUCAAGGUUAAAUUUUAACUCAUAGUUUGAUGUGCAAGACUUGAUAUUUUAACAUUUUGCAGAAGGGAAAAAACAUCUUCAGUGGUAAGUGAGAGAAUAGAUAAGAGUUUACUAUUUUACAUUUACACAUGAGGUUUCAUCAUCACCUACCUCUACUCCUUUCUACGUGAUGUGAGUCAUGCAGAGUUGCAGACUCCAACGCAAUAGACGAUUACAGGGGAAUUUUGCACUAUUUUAACACUCAGUUCAGACCAAAUGUACAGCCAUAACAUAAAUUAAAAAGGAAUCCCAAACCUUGUGCCUUAAUUAGCAUAUAAUACUUCUUGACUUCUAGUAUUAUGUUCCUAAUGCACUAAUGCCACACCCUGUGCUGAACUGUGAAAACCACUAAACCCCCAUUCCCGUGCAACAGAGGAUACUCAAAACUGGUACUGAUGUAAACCACCCACCCCCAUUCCUACACAAAAUGAAAAUGAUGCAUGUCCACGACAAAUCUAACCAGAUAUGAGACUAUCAGAACCUGCAACCAAUUAGUUGAUGUGAUUGCAAAAUGCAAGCUCAGGUGCUGGUUCUUUAUUAAGUACUUCCUCCGUUUCGCAAUGUAAGUUAUUCUAGCAUUUCUCACAUUCAUAUUGUGAAACGGAGGGAGUAUGAUGAUACUUUUUAGGAAAUACACAAAAGUUUGAAUAUCUUUGCAUUAAGAUUGGAAUUAAGCAUGAAUGUUUUUUAGGGAAUAUACAAAAGUUUGUGUAUCUUUGCAUUGAGAUUGGAAUUAAGUAUG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
10.16%
ME_num:
MEP:
69.72%
HE_num:
HEP:
19.92%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
coleoptile
Tau :
0.60
Avg Expression:
6.43
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 1hA | -1.01463880242725 | 0.0108117197601641 |